Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00844 ATGAGAACTTTCGCTTCTCGTACCTCCAATTTCTTGAAACACAAACTCGAAAACTTCCCATTAATTCATCAAAACCCCAATTTCAATCTCAATTTCATAAGACAAATGTCACAATCCACCTCAATCCCCAAAAAACAACAAAGGATTCGCGACCATGGTTACGACAACTACATGGAAATCGAAAAGAAAACCCGCAAAGTCCTAAAATTCCAAAACCTCATTCTATCCGACCCCAACCAATCAATCCCAATCCCACGACTCGAAACCCTAGCACGCCGAATCGGGTTCACGCGCCACGAAGCAAGCGCGTTCCTCCTCAAATTCCCGCACGTGTTCGAAATCTTCGAACACCCAGTTCAACGCATCCTCTTCTGCCGTCTAACCCGAAAAGCGATCCTCCAAATTGAACAAGAACGCCACGCGCTTGCTTCACAAACCCCACGCGCCGTCACTCGCCTCCGGAAGCTTCTCATGATGTCTAACGGTGACCGCCTCCGACTCGAGCATGTGAGAATCGCACGCTCCGCCCTTGGGTTACCGGACGATTTTGAATTCTCGGTGGTTCTTAGGTACCCTGAATTTTTTAGGTTAGTTGATGCTGAAGAAACTAGGAACAAGTACATTGAGCTTGTGGAAAGAGACCCAAAGTTAGCAACTTGTGCAATTGAGGAAGTTAGGGAGAGAGTTTATAGAGAAAGGGGTGGTGATGCTGAAGATGTTAGGTTTTCTTTTTTGATTAATTTCCCACCTGGTTTTAAGATTAGTAAGTATTTTAGAATTGCAATGTGGAAGTGGCAAAGGCTTCCTTATTGGTCACCTTATGAGGATGTTTCTGGGTATGATTTGAGGTCTATTGAGGCACAGAAGAGAATGGAGAAGAGGGCTGTTGCTACAATTCATGAATTGTTGTCATTGACTGTGGAGAAGAAGATTACATTGGAGAGGATTGCACATTTTAGGATGGCAATGAATCTTCCTAAGAAGTTGAAGGAGTTTCTTCTTCAACATCAGGGGATTTTTTATGTCTCCACTAGGGGGAATCAAGGGAAGCTTCACACTGTTTTCCTTAGGGAGGCTTATAGGAAGGGGGAACTGATTGAGCCTAATGACTTGTATTTGGCACGCCGGAAGCTGGCCGAGTTGGTGTTGTTGAGTCCCCGGAAAGCTAAGGTTGATAGGGAATTGGTTGGATATAGGAGGAGCAGGTTAGATGATGAAATGGGGCAAGTGACAAGGGCTTATGTGGAGGATGCTGGTGAAGACTTCAAGGGTGAAGATGATGTGGGGGGAGATAAGGATGCAGAGGATGATGATTTGACATCGGATATAGGTTCTGATGTTGATTCTGGAGATGAGGATGATGATTTTGATGATGATAGTGTATCAATACAAAGACATCTTGAGTGA 1407 0.4456 MRTFASRTSNFLKHKLENFPLIHQNPNFNLNFIRQMSQSTSIPKKQQRIRDHGYDNYMEIEKKTRKVLKFQNLILSDPNQSIPIPRLETLARRIGFTRHEASAFLLKFPHVFEIFEHPVQRILFCRLTRKAILQIEQERHALASQTPRAVTRLRKLLMMSNGDRLRLEHVRIARSALGLPDDFEFSVVLRYPEFFRLVDAEETRNKYIELVERDPKLATCAIEEVRERVYRERGGDAEDVRFSFLINFPPGFKISKYFRIAMWKWQRLPYWSPYEDVSGYDLRSIEAQKRMEKRAVATIHELLSLTVEKKITLERIAHFRMAMNLPKKLKEFLLQHQGIFYVSTRGNQGKLHTVFLREAYRKGELIEPNDLYLARRKLAELVLLSPRKAKVDRELVGYRRSRLDDEMGQVTRAYVEDAGEDFKGEDDVGGDKDAEDDDLTSDIGSDVDSGDEDDDFDDDSVSIQRHLE* 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00844 468 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 34 417 IPR045040 GO:0003723
Rops5g00844 468 MobiDBLite consensus disorder prediction 415 468 - -
Rops5g00844 468 Pfam Plant organelle RNA recognition domain 50 385 IPR021099 GO:0003723
Rops5g00844 468 MobiDBLite consensus disorder prediction 415 429 - -
Rops5g00844 468 MobiDBLite consensus disorder prediction 430 458 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00844 Rops-Chr5 16212856 16216737 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00844 - - gmx:100782167 735.332
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops5g00844 5 16212856 16216737 Rops5g00844 5 16212856 16216737 ECH