Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00789 ATGCAGAACCTTTGCCAAAATGAGGCCTCCCAAGCATGCCATCAATGTTGCTGCACAACCCCATTTTTCAACTCACCAGAATCACATAACAAAAATGCAAAACCCAGAAACAGTTCTGCTGAGTGTCGCCACAACTTTGCAGCTACAACAACATCATCTATCTTCCCAAACACTCATTTCACTAACCATGAGTCTCTTCCATCTCTGCAGGAATCATTCAGTGAATTCAACAAAGTGTACCCTCAATATTCTGAGACTGAACAAGTTGACCATGTTAGAGCCAATGAATATTCCCACCTCTCAGTCTCCAACCATACTTGCCTTGATTATATTGGTATTGGCCTCTTCTCTTACTCTCAATTGCAACATCATGATACATCAAATATCCAACTTGCTTCCTCTTCCATTACTCAAACACCCAAATCTCAACCCCAATATTCAGATATTCCCTTCTTTAGTATATCCTCTAAGACTGGGAGTTTGAAGACTTTGTTGTTACATGGTGGACAAGACTCAGAATTTGAGTCTGCAATGAGAAAAAGAATCATGGGTTTCCTTAACATATCTGAAAATGATTACCTCATGGTTTTCACAGCAAATAGAACATCAGCTTTCAAACTTGTTGCAGATTCCTACCAATTCCAATCTAGTAGGAGGCTTTTGACAGTTTATGACCATGAGAGTGAGGCTGTGGAAGCAATGGTTAGTTGCTCAGAGAAGAGAGGAGCAAAGGCAATGTCAGCAGAGTTCTCATGGCCAAGGCTTAGGATTCAGACTACAAAATTAAGGAAGATGATTGTAAGTAAGAGAAAGAAGAAGAAAAGCAGGGGCCTTTTCGTTTTCCCATTTCATTCAAGAGTAACAGGAGCTAGATATCCTTATCTTTGGATTAGCTTAGCACAGGAGAATGGGTGGCATGTATTGGTTGATGCTTGCGCATTGGGACCAAAAGACATGGACTGTTTTGGCCTCTCTCTCTTTCAGCCAGACTTCCTAATTTGTTCTTTTTACAAGGTTTTTGGTGAAAACCCTTCTGGATTTGGATGCCTTTTTATCAAGAAATCTGCTATTTCCAGTTTGGAAGCTTCACCTTCTGCAGGAATAGTGAACCTTGTGCCAGAAAAACAGCCACATCAACCTTCAGAGGATTCTTCTGGTACTGACACAGAACGTGAAAAATCAATACTTAGTTTACATGAAGATGAACCATTTTATTTGACATCTATCACTGGTCCAATACAAAACACACAATCTGGAAAATTTGAAGGAGAATCATCTGAGATTCAGATCAAAGAGGCACCTGAAGAGTCAGAAGCTCCTCAAAGTTCTGAAATCGAGGAGGTACAAAAGCCAGTTCAGACCCTTCAGAATGTCCAAGAAAGTGAAAAAGAGAGCTCTAATATTGAATGCAAGTGCTTAGATCAAGTTGATTCTTTAGGAGTGATACTGATCACCAACAGGGCAAGGTGCCTGATAAATTGGCTGGTAAACTCAATGTTGAAGCTTAAGCATCCTAACACAGAAGGGGTTCCCTTAGTCAAGATTTATGGACCAAAAGTGAAATTTGATAGGGGACCAGCTATGGCATTCAATATATTTGATTGGAAAGGTGAAAAAGTTGAGCCTGTTCTTGTCCAAAAACTTGCGGATAGAAGCAACATTTCTATCAGCTATGGATTCCTGCATCATATTTGGTTTGCAGATAAGTATGCAGAAGAGAAGGGAAGAGTCCTACAGACCAAAGTAGTTGGAGACCAAGGAGTGACAACCACCAAGAAGAAAGAAAAAGATAATGTTAGAATAACTGTGGTTACTGCTGCATTAGCCTTTCTGGCTAATTTTGAAGATTCCTATAAGCTTTGGGCTTTTGTTGCTAGGTTCCTTGATGCTGACTTTGTGGAGAAGGAGAGGTGGAGATATACTGCTCTCAATCAGAAAACTGTTGAAGTTTAA 1953 0.4009 MQNLCQNEASQACHQCCCTTPFFNSPESHNKNAKPRNSSAECRHNFAATTTSSIFPNTHFTNHESLPSLQESFSEFNKVYPQYSETEQVDHVRANEYSHLSVSNHTCLDYIGIGLFSYSQLQHHDTSNIQLASSSITQTPKSQPQYSDIPFFSISSKTGSLKTLLLHGGQDSEFESAMRKRIMGFLNISENDYLMVFTANRTSAFKLVADSYQFQSSRRLLTVYDHESEAVEAMVSCSEKRGAKAMSAEFSWPRLRIQTTKLRKMIVSKRKKKKSRGLFVFPFHSRVTGARYPYLWISLAQENGWHVLVDACALGPKDMDCFGLSLFQPDFLICSFYKVFGENPSGFGCLFIKKSAISSLEASPSAGIVNLVPEKQPHQPSEDSSGTDTEREKSILSLHEDEPFYLTSITGPIQNTQSGKFEGESSEIQIKEAPEESEAPQSSEIEEVQKPVQTLQNVQESEKESSNIECKCLDQVDSLGVILITNRARCLINWLVNSMLKLKHPNTEGVPLVKIYGPKVKFDRGPAMAFNIFDWKGEKVEPVLVQKLADRSNISISYGFLHHIWFADKYAEEKGRVLQTKVVGDQGVTTTKKKEKDNVRITVVTAALAFLANFEDSYKLWAFVARFLDADFVEKERWRYTALNQKTVEV* 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00789 650 MobiDBLite consensus disorder prediction 444 461 - -
Rops5g00789 650 MobiDBLite consensus disorder prediction 370 393 - -
Rops5g00789 650 MobiDBLite consensus disorder prediction 412 461 - -
Rops5g00789 650 Pfam Aminotransferase class-V 177 364 IPR000192 -
Rops5g00789 650 Gene3D - 167 396 IPR015421 GO:0003824
Rops5g00789 650 SUPERFAMILY PLP-dependent transferases 176 365 IPR015424 -
Rops5g00789 650 PANTHER MOLYBDOPTERIN COFACTOR SULFURASE MOSC 70 608 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00789 Rops-Chr5 14945543 14947908 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00789 - - aprc:113867925 1023.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops5g00789 5 14945543 14947908 Rops6g02809 6 50405341 50407563 ECH
Rops5g00789 5 14945543 14947908 Rops5g00789 5 14945543 14947908 ECH
Rops5g00789 5 14945543 14947908 Rops6g02809 6 50405341 50407563 PCT