Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00686 ATGAAGCCTCTTATGCTACGTTTGTCACTGTTTATTTTTGTTCCTCTGCTTCTTTCAATCTTGTTTGTGATGCTTATGCCAAAGGAAACTGCTATGTCAACAACAACCTATGAGGTATTTGGAGTGAAGATAGAGAAGAACCCACCAGAATCCAAACTCAATGAGCTTGGAGTGACCACTTGGTCAAAGTGGGAAGGTGGTCCAACCAAAATTCCATGGTCCTTTACAGCCGAAGAGACTATGTATCTGCTGGAGGGAAAAGTGAAGGTTACTGTTGAAGAGTCTGTTGGGTCATTTGAAATTGGGGCTGGTGATTTAGCTGTCTTCCCAAAAGGAATGAACATCACTTGGGAAGTAATTGAAGCTGTAAAGAAGCACTACAGCTTGAAAAAATAA 396 0.4116 MKPLMLRLSLFIFVPLLLSILFVMLMPKETAMSTTTYEVFGVKIEKNPPESKLNELGVTTWSKWEGGPTKIPWSFTAEETMYLLEGKVKVTVEESVGSFEIGAGDLAVFPKGMNITWEVIEAVKKHYSLKK* 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00686 131 Pfam EutQ-like cupin domain 54 127 IPR008579 -
Rops5g00686 131 SUPERFAMILY RmlC-like cupins 41 127 IPR011051 -
Rops5g00686 131 PANTHER OS04G0445200 PROTEIN 31 130 - -
Rops5g00686 131 CDD cupin_TM1112-like 60 129 - -
Rops5g00686 131 Gene3D Jelly Rolls 30 129 IPR014710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00686 Rops-Chr5 12196289 12198739 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00686 K06995 - gmx:100807654 223.402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops5g00686 5 12196289 12198739 Rops5g00686 5 12196289 12198739 ECH