Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00657 ATGGCACACAAAATGCTATGCAAACCAAGCCTATTTCTCAGTCTTAGACTTAGCAGAATAGGTAGTTTCAATTCACAACACATTCATCATCATCATCATCATCCATTTTCCCACTCACTACCACCCTCTTCCTTTTTCAACAACACTCATCCAATCTCACTTCATTGCACAACAAGAACAACCACCACCACCACAGCCATTGACGATTCATCAAAAGGGCACCTTCAACTCACGGATGAGGAGCTCATGCGTCAGTGTGAGATGAGCACCTTCAAGACCTCAGGTCCAGGTGGTCAACACCGTAACAAGCGTGAGTCCGCTGTGCGACTCAAGCACCTACCCACTGGCATCATCGCTCAGGCTTCTGAGGACCGTTCCCAGCATAAGAATCGTGCTTCTGCACTCAATCGCCTTCGCTCTCTTATCTCCCTCAAAGTCAGGAAAACAGTGGAGCTTGATGCTTATTCGCCACCTCAAGAGCTTCTTCAGATACTTCCTCCCAAGTCATCCATTAGAGGGTCTGATTGTGGTCCACAAATTGGACCCAATAACCCAAAATTTGCATTGGGAATGCAAGCTCTTTTAGATCTTATTTTTGCAGTTGAGGGATCTGTCTCAGATGCTGCAAAATATCTTGGGTTATCTACTGGGGCACTGTCTAGGTTAATCCTATCTGATGATTCACTTAGAAAGGAAGTAAATGATCTGCGGGCATCAAAGGGTATGAAGCCTCTCAAGTAG 741 0.4561 MAHKMLCKPSLFLSLRLSRIGSFNSQHIHHHHHHPFSHSLPPSSFFNNTHPISLHCTTRTTTTTTAIDDSSKGHLQLTDEELMRQCEMSTFKTSGPGGQHRNKRESAVRLKHLPTGIIAQASEDRSQHKNRASALNRLRSLISLKVRKTVELDAYSPPQELLQILPPKSSIRGSDCGPQIGPNNPKFALGMQALLDLIFAVEGSVSDAAKYLGLSTGALSRLILSDDSLRKEVNDLRASKGMKPLK* 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00657 246 Coils Coil 118 138 - -
Rops5g00657 246 Gene3D - 47 149 - -
Rops5g00657 246 PANTHER LD18447P 63 240 - -
Rops5g00657 246 SUPERFAMILY Release factor 84 148 IPR045853 -
Rops5g00657 246 Pfam RF-1 domain 85 144 IPR000352 GO:0003747|GO:0006415
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00657 Rops-Chr5 11192459 11197930 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00657 - - gmx:100793467 340.117
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops5g00657 5 11192459 11197930 Rops5g00657 5 11192459 11197930 ECH