Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00652 ATGAATAGCATCTTCAAATTTTATCACAGTTTGGTTAATTCAAATCCAAAGAAAGAAAAGAAGAGAGAAAGTGGTGGTTCAATTCTTACAAGAAGAGAGGAGAATAATAATATTATGGGGTTGAAATTGAAAGACACATTCTACATATCACATGGATCACCAACACTTGCCATAGATGATTCAATCCCTGCATGGAAGTTCTTGAATTCATGGAAGGAGGTGTTTCCGCCGCGACCCTCTTCCATTCTTGTCATCTCCGGCCATTGGGACACCGATTTTCCGACGATCAATGTCGTTGACAGCAATGATACTATCCATGACTTCTATGGTTTCCCCAAAGCCATGTATAAGCTTAAGTATCCAGCAGCTGGGTCTCCAGACTTGGCAAAAAGGGTGAAGGAGCTACTCATAGCATCAGGGTTCAACCATGTGGATGAAGATAGAAAACGTGGGCTTGACCATGGTGCTTGGGTGCCTCTCATGTTGATGTACCCAGAGGCAGATATCCCAGTGTGTCAACTCTCTGTCTCATCCAACAAAGATGGTACTTATCACTATAACATGGGAAAGGCATTGGCCCCTCTTAAAGATGAAGGTGTTCTAATCATTGGGTCTGGTAGTGCCACTCATAACCTTAGAGCAATTGGACCTAGAAATAGCCCTCCTGCTCCTTGGGCTGAGGCATTTATGTCATGGTTGAAAAGCTCTCTCCTTGAGGGAAGATATGAGGAAGTAAATCACTACGAAGAGAAGGCCCCATATGCAAAAATGGCTCATCCCTGGCCAGATCACTTCTTCCCATTGCATGTGGTAATGGGGGCTGCTGGTGAAAACGCCAAGGCGAAAGTTGTACATGATAGCTGGGATGGTGGTTCCATTTCTTATGCTTCTTTTGGTTTTACAGCTGCCACTACCACTTGA 921 0.4408 MNSIFKFYHSLVNSNPKKEKKRESGGSILTRREENNNIMGLKLKDTFYISHGSPTLAIDDSIPAWKFLNSWKEVFPPRPSSILVISGHWDTDFPTINVVDSNDTIHDFYGFPKAMYKLKYPAAGSPDLAKRVKELLIASGFNHVDEDRKRGLDHGAWVPLMLMYPEADIPVCQLSVSSNKDGTYHYNMGKALAPLKDEGVLIIGSGSATHNLRAIGPRNSPPAPWAEAFMSWLKSSLLEGRYEEVNHYEEKAPYAKMAHPWPDHFFPLHVVMGAAGENAKAKVVHDSWDGGSISYASFGFTAATTT* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00652 306 CDD 45_DOPA_Dioxygenase 46 300 IPR014436 GO:0008270|GO:0016701
Rops5g00652 306 PIRSF Doxgns_DODA 39 302 IPR014436 GO:0008270|GO:0016701
Rops5g00652 306 PANTHER UNCHARACTERIZED 42 302 - -
Rops5g00652 306 Pfam Catalytic LigB subunit of aromatic ring-opening dioxygenase 46 300 IPR004183 GO:0006725|GO:0008198|GO:0016491
Rops5g00652 306 Gene3D - 35 301 - -
Rops5g00652 306 SUPERFAMILY LigB-like 46 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00652 Rops-Chr5 11140704 11144838 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00652 K15777 - gmx:100810694 493.426
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops5g00652 5 11140704 11144838 Rops5g00652 5 11140704 11144838 ECH