Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00516 ATGGCATTTGCTAAAGTTACAGTGATTGCTACTTCTCTCTATGGCGTTGCTCGTATCAGTTACTGTGACTCAAAGGTTCCTCTTCTGGGTTCCCATAACGACGTCGTTTCTGGGTTTTGTGTCGGGTCACATGCTGGGAAGCAAAGTGATGTTGTGCTTGAAAGGAGGAAGTTGAAGTCTGTTGTTGATAATAATAACCGCATTGTTGAGAATGCCCAGATGAAATCTGAAATCACCCAGATGAAATCCAGTGTTGAAATCCCAGTTTCTTGCTATCAGCTTATTGGCGTTCCTGATCGAGCTGAGAAAGATGAAATTGTTAAGGCAGTTATGAGTTTGAAAAATGCAGAAATTGAAGAAGGTTACACGATGGATGTTGTTGCATCTCGTCAGGATCTTCTGATGGATGTAAGGGATAAGATCCTTTTTGAGCCAGAATATGCTGGTAACCTGAAGGAAAAGATTCCCCCAAAATCTTCCCTTCGTATTCCTTGGTCTTGGTTGCCTGGTGCTCTATGCCTTCTTCAAGAGGTTGGAGAATCAAAGCTTGTGCTGGACATTGGACGGACAAGTCTTCAGCATCAAGAGGCCAAGCCATACACAGATGATTTGATTCTTTCTATGGCACTAGCTGAGTGTGCAGTTGCGAAGATTGGCTTTGAGAAGAACAAAGTATCTCAAGGTTTTGAAGCTCTAGCTCGTTCCCAGTGTCTTCTAAGAAGTAAACCATCTCTTGCAAAAATGACACTCCTATCTCAAATTGAAGAATCTCTTGAAGAGCTTGCACCTGCTTGCACCTTGGAACTACTAAGCATGCCACATACCCCTGAAAATGTTGATCGAAGACGAGGAGCAATTGCAGCTTTGCGTGAATTGCTTAGACAAGGTCTTGATGTTGAAGCCTCATGCCAAGTACAGGACTGGCCTTCTTTTTTAAGCCAAGCATTTGACAGTTTGCTGGCCGGTGAGATAGTTGATCTTCTTCCTTGGGATAACTTAGCTGTGATGCGAAAGAATAAGAAGACAATTGAATCACAGAATCTAAGGATTGTAATTGATTCAAACTGTTTCTATAGAGTTTTTACAGCTCATATGGCACTTGGGTTTTCCAGCAAGCAAAAAGAGTTGATTAACAAAGCAAAAAGCATATGTGAATGTTTGATAGCTTCAGAGGGCATTGATCTGAAATTTGAAGAAGCTTTTTGCTTATTCCTTCTTGGACAGGGCACAGAGGCTGAGGTGGTTGAAAAGCTAAAGCAGCTTGAGCTGAACTCAAATCCAAAACATAATTCGGTCTTGGGGAAGGCAATAATGGATGCTTCTCCTACAAATCCGTCATTGGAAATGTGGCTGAAGGATTCTGTGCTTGATTTATATCCAGATACTAAAGGTTGTTCTCCAGCTCTGGCCAATTTCTTTAATGCTCAAAAGAAATTTTCTGGAAGCAAGAATCCTAAAGGTGCTCTGCAAACATTGCCGACGATATGTCATAGACCTCTATCCTCATCCGGTTCTTTAGAACGAAGAGATTTTGAGGAACCTCGCTCATATATGAGTTCTTCTTCAAATGTAGGGTTTGCTGTCAAGCAGCTGACTCCTACTGATTTGCAGAGTTCACTGCTATCTGGCAAAAGCGAAAATGGACTCAATCTTAGTGAATCACCTGTTCAAGTGAAAAGGAACCTTAGCACTCATCACAATGGAATTTGGAATAGTCACTTCATTCATGCTCACATATTTGAAAGAATAACACACATTACCGTACTGGGTTGTATTGCATTTGTTACCATCAAGTTGTTGGGAATGAACATAAGCAAAACTTTTACTAGCTCACATCGTGCTTTCACGAAAGCCAATGATAACATTGCTTGGACTGCAGATTCATCTGCTGACTACACTGTAGGTCCTGCTTATATTAGACATAGTACTATCCCCAATAAACTGAAGAGAATCCTGTCAATGGTTAAGATACAGTTTTTGCACCGGTCAGATGCTGGAAATCAAAGTGATTTACACACTTCTCTTACCTCATCATCCTCCCCTATTAATGTGTACAGAAGCCTGATGACTGTGGAAGAGGCAGAAACCCTTGTTAGGCAATGGCAAACAATCAAAGCTGAAGCTTTGGGGCCTAACCATGAAATTAATGGCCTGGCTCAAGTCCTTGATGAATCCATGCTTGCTCAGTGGCAAGCTTTGGCTGATGCTGCAAAAGAAGGATCATGTCACTGGAGATTTGTTTTGCTAAAATTATCTGTCCTCAGAGCTGACATTCTATCTGATGGAAATGGGGCAGACATGGCAGAAATAGAAGCTCTTTTAGAGGAAGCAGCTGAACTTGTTGATAGTTCTCAGCAAAAAAACCCAAACTACTATAGCACTTACAAAGTTAAGTATATTATGAAGAGGCAAGATGATGGATCATGGAAGTTCTGTGAAGGTGATATTAGAACACCGTGA 2460 0.413 MAFAKVTVIATSLYGVARISYCDSKVPLLGSHNDVVSGFCVGSHAGKQSDVVLERRKLKSVVDNNNRIVENAQMKSEITQMKSSVEIPVSCYQLIGVPDRAEKDEIVKAVMSLKNAEIEEGYTMDVVASRQDLLMDVRDKILFEPEYAGNLKEKIPPKSSLRIPWSWLPGALCLLQEVGESKLVLDIGRTSLQHQEAKPYTDDLILSMALAECAVAKIGFEKNKVSQGFEALARSQCLLRSKPSLAKMTLLSQIEESLEELAPACTLELLSMPHTPENVDRRRGAIAALRELLRQGLDVEASCQVQDWPSFLSQAFDSLLAGEIVDLLPWDNLAVMRKNKKTIESQNLRIVIDSNCFYRVFTAHMALGFSSKQKELINKAKSICECLIASEGIDLKFEEAFCLFLLGQGTEAEVVEKLKQLELNSNPKHNSVLGKAIMDASPTNPSLEMWLKDSVLDLYPDTKGCSPALANFFNAQKKFSGSKNPKGALQTLPTICHRPLSSSGSLERRDFEEPRSYMSSSSNVGFAVKQLTPTDLQSSLLSGKSENGLNLSESPVQVKRNLSTHHNGIWNSHFIHAHIFERITHITVLGCIAFVTIKLLGMNISKTFTSSHRAFTKANDNIAWTADSSADYTVGPAYIRHSTIPNKLKRILSMVKIQFLHRSDAGNQSDLHTSLTSSSSPINVYRSLMTVEEAETLVRQWQTIKAEALGPNHEINGLAQVLDESMLAQWQALADAAKEGSCHWRFVLLKLSVLRADILSDGNGADMAEIEALLEEAAELVDSSQQKNPNYYSTYKVKYIMKRQDDGSWKFCEGDIRTP* 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00516 819 PANTHER PLASTID DIVISION PROTEIN CDP1, CHLOROPLASTIC-RELATED 42 817 IPR044685 -
Rops5g00516 819 Pfam ARC6-like, IMS domain 694 811 IPR025344 -
Rops5g00516 819 Coils Coil 767 787 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00516 Rops-Chr5 8658214 8665289 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00516 - - gmx:100801086 1292.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops5g00516 5 8658214 8665289 Rops5g00516 5 8658214 8665289 ECH