Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00514 ATGGTCGTCGCCATCTCAAAAGCCGCTTCAACATCAACAATGTCTCCAGATCCCTCTTCCTTCTCCCTCCCCAAAACCCTAAAACTCAAAACCAAACAACAAGAGCTTCTCCTTCGTGTAACAGTATTAACCCTAATCTACATCCTCGCCTTCATCACTCGCCTCTTCAGCGTCCTCCGTTATGAATCAATGATCCATGAATTCGACCCTTACTTCAACTACCGAGTCACTCAGTTCCTCACTCGCAACGGTTTCACCGAGTTCTGGAACTGGTTCGACTCGGAGAGTTGGTACCCACTCGGTCGCATTGTCGGCGGCACGCTCTACCCTGGTTTAATGCTCACCGCCGCCGGGATTTACAAAACCCTAAATTTCCTCAAATTCGCTGTTCACATCCGCGAAATCTGCGTCCTAACGGCGCCGTTTTTCGCGTCAAACACGACGATCGTTGCTTACTTCTTCGGCAAGGAAATTTGGGATTCCGGCGCCGGGATCGTCGCCGCTGCGTTGATCGCGATTTGTCCTGGTTACATCTCAAGATCGGTGGCGGGATCGTATGATAACGAAGGGGTTGCGATTTTCGCGTTGTTGTTGACGTTTTATCTGTTTGTTAAGGCAGTGAATACTGGTTCTTTGGCTTGGGCTTTGGGTGCGGCGTTTGGGTATTTCTATATGGTTTCGGCTTGGGGTGGTTATGTTTTCATTATCAATTTGGTTCCGCTTTATGTGTTGGTGTTGTTGATCACTGGGAGGTACTCGTTGAGGCTTTATGTTGCTTATAATTGCTTGTATGTGTTGGGGATGTTGCTTGCAATGCAGATTCGGTTTGTTGGGTTTCAGCATGTTCAGTCTGGGGAGCATATGGCTGCTATGGGAGTGTTTTTCTTGCTCCAGGTGTTTTTCTTCTTGGATTGGGTTAGGCATTTGCTTGGTGATGCAAGGTTGTTTCAAGCATTTTTGAGGATCACTGTAACTAGTGCTGTAGCTGTTGGTGCCATTGCCTTGGGAGTAGGCACAGCATCTGGTTTTATATCTCCATGGACTGGAAGGTTTTACTCCTTGCTTGATCCGACGTATGCCAAGGATCACATCCCAATTATTGCATCTGTCTCTGAGCATCAGCCAACTGCTTGGTCATCCTTCATGTTTGATTTCCATATCTTGCTGTTCCTTTTCCCTGCTGGGCTCTATTTTTGCTTCAAGCGCTTGTCAGATGCCACAATCTTCATCGTTATGTATGGTCTCACAAGCATGTATTTTGCTGGTGTTATGGTTCGATTGATTCTTGTTGCTACCCCTGCTGTATGCCTCATTAGTGCTATTGCGGTTTCTGCCACTGTGAAGAATTTGACCCGGTTGCTGAGGACCAAAAGCCAAGCTGTTCAAAGTGGTTCTGGTAAAGGAGCTAGTAGTGCAAAAGGTTCTTCCAAGGGTATAATTGATAACTCCCAGCCTTTCCAAAAGAATGGTGCTATTGTGTTACTTCTTGGTGCTTTTTATCTGCTCAGTAGATATGTTATTCACTGTACTTGGGTCACATCAGAGGCTTACTCATCTCCCTCGATTGTCTTGGCTGCAAGGGGTGCCCATGGCAACAGGGTCATCTTTGATGATTATCGTGAGGCTTACTTTTGGCTTCGCCAGAACACACCACCAGATGCCAAGGTGATGTCATGGTGGGATTATGGTTATCAAATCACTGCCATGGGAAACAGAACAGTTATTGTTGACAATAACACCTGGAACAATACACACATAGCAACTGTTGGGCGTGCAATGTCATCTTATGAGGATGAGGCTTATGAGATAATGAGATCGCTTGATGTTGACTATGTATTAGTTGTGTTTGGTGGTGTTACTGGTTATTCTTCTGATGATATTAATAAATTTCTATGGATGGTGAGAATTGGTGGTGGAGTTTTTCCTGTAATAAAGGAACCTGATTACCTTGTCAATGGAGAATATCGTGTAGATAAAGGAGCAGCTCCTAAGATGTTGAACTGTCTTATGTACAAGCTGTCTTATTATCGGTTTGGGGAGCTGACAACAGAATATGGCAAACCACCTGGCTATGATCGAGCTAGAGGTGTGGAAATTGGAAATAAGGACATAAAGCTGGAGTACTTGGAAGAGGCTTTCACTACCCAAAATTGGATTGTTCGTATTTATAAAGTGAAACCACCTAAAAACAGGTGGTGA 2199 0.4497 MVVAISKAASTSTMSPDPSSFSLPKTLKLKTKQQELLLRVTVLTLIYILAFITRLFSVLRYESMIHEFDPYFNYRVTQFLTRNGFTEFWNWFDSESWYPLGRIVGGTLYPGLMLTAAGIYKTLNFLKFAVHIREICVLTAPFFASNTTIVAYFFGKEIWDSGAGIVAAALIAICPGYISRSVAGSYDNEGVAIFALLLTFYLFVKAVNTGSLAWALGAAFGYFYMVSAWGGYVFIINLVPLYVLVLLITGRYSLRLYVAYNCLYVLGMLLAMQIRFVGFQHVQSGEHMAAMGVFFLLQVFFFLDWVRHLLGDARLFQAFLRITVTSAVAVGAIALGVGTASGFISPWTGRFYSLLDPTYAKDHIPIIASVSEHQPTAWSSFMFDFHILLFLFPAGLYFCFKRLSDATIFIVMYGLTSMYFAGVMVRLILVATPAVCLISAIAVSATVKNLTRLLRTKSQAVQSGSGKGASSAKGSSKGIIDNSQPFQKNGAIVLLLGAFYLLSRYVIHCTWVTSEAYSSPSIVLAARGAHGNRVIFDDYREAYFWLRQNTPPDAKVMSWWDYGYQITAMGNRTVIVDNNTWNNTHIATVGRAMSSYEDEAYEIMRSLDVDYVLVVFGGVTGYSSDDINKFLWMVRIGGGVFPVIKEPDYLVNGEYRVDKGAAPKMLNCLMYKLSYYRFGELTTEYGKPPGYDRARGVEIGNKDIKLEYLEEAFTTQNWIVRIYKVKPPKNRW* 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00514 732 MobiDBLite consensus disorder prediction 1 21 - -
Rops5g00514 732 Gene3D - 535 685 - -
Rops5g00514 732 PANTHER DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE SUBUNIT 25 731 IPR003674 GO:0004576|GO:0006486|GO:0016020
Rops5g00514 732 FunFam dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A 534 686 - -
Rops5g00514 732 Pfam Oligosaccharyl transferase STT3 subunit 40 518 IPR003674 GO:0004576|GO:0006486|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00514 Rops-Chr5 8640952 8646753 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g00514 6 731 Miscellaneous Gene Families AT1G34130 85.616 0.0 1278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00514 K07151 - gmx:100816018 1326.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops5g00514 5 8640952 8646753 Rops5g00514 5 8640952 8646753 ECH