Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00503 ATGGAGAAACTGAGGCCAGCGTGGGCTGTGAAGGCTATCATCGTCATTGTCTTCACTTCGATTCTGTTCCGATGTGTCTGTGGTGTTAACCACACCGTCGGTGGAGCTTCCGGCTGGGATCTCCGTTCTAATATCCAAGCCTGGTCATCTTCCACCACATTTAATGTCGGTGATGATCTTTTGTTTCAATACACGCCTGTTCATGATGTGGTGGAAGTAAACCAACAAGGTTACGACACGTGTACGATCGCCAACGCTATATCCACTGACGATACCGGAGAAACTGTTATCCACCTCACCGAAGCTGGAACCCGCTACTTTGTCTGTGGGCGAATGGGCCATTGCCAACAAGGCCTCAAACTTGAAGTCCAAGTTCAGGCCCAGTCCAACAACAATGACTCCAATGACGGTCTAGATCGCAGCAGAAGACGTTCTCCTCCTCCTCCACGTCATTCTCCTCCCCCTCCTCCTCTTCCACATCGTTCTCCTCCTCCTCCTCCTCCCCTGGCTTTTCCACCTCAACATGATCTAAACCCATCTGCGGAAGGGCCTTGCGATATTTCCTTTGCTGAGAAGAGCCATGGACTGTTGGTGGTGTCATTGATTACCCTCATAATCATCTTCCCTTTCACTCTCGGTTTATTATATACTTGA 654 0.4969 MEKLRPAWAVKAIIVIVFTSILFRCVCGVNHTVGGASGWDLRSNIQAWSSSTTFNVGDDLLFQYTPVHDVVEVNQQGYDTCTIANAISTDDTGETVIHLTEAGTRYFVCGRMGHCQQGLKLEVQVQAQSNNNDSNDGLDRSRRRSPPPPRHSPPPPPLPHRSPPPPPPLAFPPQHDLNPSAEGPCDISFAEKSHGLLVVSLITLIIIFPFTLGLLYT* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00503 217 PANTHER BLUE COPPER PROTEIN 29 132 IPR039391 GO:0009055
Rops5g00503 217 Gene3D - 28 131 IPR008972 -
Rops5g00503 217 MobiDBLite consensus disorder prediction 148 174 - -
Rops5g00503 217 MobiDBLite consensus disorder prediction 129 185 - -
Rops5g00503 217 ProSiteProfiles Phytocyanin domain profile. 29 127 IPR003245 GO:0009055
Rops5g00503 217 FunFam Blue copper 27 131 - -
Rops5g00503 217 CDD Phytocyanin 29 125 - -
Rops5g00503 217 Pfam Plastocyanin-like domain 43 118 IPR003245 GO:0009055
Rops5g00503 217 SUPERFAMILY Cupredoxins 28 126 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00503 Rops-Chr5 8571271 8572438 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g00503 13 125 Miscellaneous Gene Families AT2G32300 42.105 1.94e-29 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00503 - - gmx:102664120 251.521
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops5g00503 5 8571271 8572438 Rops5g00503 5 8571271 8572438 ECH