Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00369 ATGGAGTCAGGGAAAGTGATCGGGTTCATTGGATTGGATGATTTGGGATTGGAGATGGCTTCTTCCCTTGTTCGCCATGGCTACCGTGTTCAAGCTTTCGAGATAAGTGATCCCATCATAAAAGAACTAGTGAAGCTTGGAGGTATTACATGTTCAAGCCCTTCGGAAGCAGGGAGAGGTGTAGCAGCTATAGTTGTCCTCCTATCTCACGTGGATCAAATTAATGATCTAATTTTTGGGGATGAGGGTGCTCTGAAAGGTCTAAAACCAGAGACAGTTCTTATTCTTCGTTCAACCATATTACCATCAGTCCTCTGTAAACTGGAGAAGGATCTGGAAGAAGTTCATAAGATAGCTTATGTTGTTGACGCATATGTCTCTTATGGGAGGTCTGATGCTTGGAATGGAAAAGTCACTATTGCATCATCTGGAAGATCAGATTCCATTGCAAGAGTACGGCCCATTCTTTCAGCAATGTGTGAAAAGCTTTTCACTTTTGAGGACGAAATTGGTGGTGGCAGTAAGGTTAAAATGGTTGCTGAGATGCTGGAAGGCATTCATTTCATTGCTTCAGTGGAGGCTCTCTCACTTGGTGCAAAAGTTGGAATTCATCCATGGATAATCTATGATATAATTTCCAATGCTGCTGGAAATTCGTGGATATTCAAGAATAATGTTCCTCTTTTGTTAAAGGGAGAGGTTAAGCATCAAATTCTAAACAGTTTTGTTAAGGAGTTGGAAACCATCTTGGATATGGCCAAGTCACTTACTTTTCCACTTCCACTTTTGGCTGCTACTCACCAACAACTTATTCATGGGGTTTCACATGTTTGTCATCAAGATGATAATGATACAGCATTAATTAAGGTTTGGGAAAAAGTTTATGGGGTGAAAATTTCAGATGCTGCAAATGCAGATACATATAACCCTGAACAACTGGCATCTGAATTCACTACTGATTCTAAGAGTGGGAGACGGGTTGGTTTTATTGGTCTTGGAGCTATGGGATTTGGCATGGCAACGCATTTGCTGAGTTCGAGTTTCACCGTTGTTGGCTATGATGTGTATGAACCAACTTTAATCCGATTTGCAAATGCTGGTGGCTTGATTGAAAATTCTCCAGCAGAAGTGGGTAAAGATGTTGATATTCTCATAATCATGGTTGCAAACGAAGCTCAAGCAGAGAATGCTTTATATGGAGAATATGGGGCAGTTTCAGTTCTTCCTCCAGGGGTAACTATCATTCTTTCTTCGACTGTTTCTCCAGCATATGTGCGTCAGCTAGAGCACAGATTGCATAATGATGCTAAGAAATTAAAGTTGGTGGATGCCCCCGTTTCTGGTGGTGTCAAGAGGGCCTCGATGGGAACACTTACGATAATGGCTTCAGGAACTGATGATGCTCTTAAGAGTGCTGGTTTAGTCTTAGCAGCCTTGAGTGAAAAGCTTTATGTTATCAAAGGTGGTTGTGGTTCTGGAAGTGGTACAAAGATGGTTAACCAATTGCTTGCTGGAGTTCATATTGCATCAGCTGCTGAGGCAATGGCATTTGCAGCACGGTTGGGTTTGAATACGAGACTGTTGTTTGATTTTATTACAAATAGTGGGGGAACATCCTGGATGTTTGAAAATCGTGTCCCACACATGCTAAACAATGATTACACACCTTATTCAGCGCTTGATATCTTTGTAAAAGACATGGGAATTGTTACTCGTGAATCATCTTCTTGGAAAGTCCCACTTCACCTATCAACTGTTGCTCACCAACTGTATCTGTCAGGTTCTGCTGCTGGTTGGGGACGTAAAGATGATGCTGGTGTGGTCAAGACAAAGAAACAAAATAATATTACTACCGAGTACCAGAGCATTGATGCCTCTAAATCAGAGAGCTTTTCTGAGACATCAGTGTCCGACAAGAGCTCATATACTTCCTCGGTTTATGAGACACTAACTGGTGTTAGAGTCGAAGGAAAACTCCAAGCACTTAAGAAAGATGTCATGTTGCATTCTCTTCCACCTGAGTGGCCCCAGGATCATGTTCTTGATATACAAAAACTAACAGAAAACAGTTCAAAGATTTTGGTTGTTCTGGATGATGATCCGACAGGAACACAAACTGTTCATGATATTGAGGTATTAACGGAATGGACTATCGATTCACTGATTGAGCAGTTTAGAAAAAGTCCAAAATGCTTTTTCATTTTGACAAACTCCAGGTCACTGAGTTCTGACAAGGCCAGTGTATTGATAAAAGAGATTTGCAGAAATCTAGACACTGCATCGAAATCAGTTGACAACATTGATTATACAGTAGTTTTGAGGGGAGATTCAACTTTGCGTGGTCATTTTCCAGAGGAACCAGATGCCGTTATTTCAGTATTGGGTGAAATGGATGCATGGATAATTTGTCCCTTTTTCCTTCAAGGAGGCCGTTACACTATTGACGACATACATTTTGTTGCTGATTCTGATGTGCTTGTTCCTGCAGGGGACACAGAGTTTGCCAAAGATGCTGCCTTTGGCTACAAGTCTTCAAACCTGTGTGATTGGGTGGAGGAAAAGACAAACGGTCGAATACTTGCAAGTAGTGTTGTATCTATTTCTATCAACCTTTTGAGGAAAGGGGGGCCAGATGCAGTTTGTCAGCATCTATGCAGTGTGCAGAAGGGGTCAGTATGCATAGTTAATGCAGCTAGTGAAAGAGACATGGCTGTATTTGCGCTTGGAATGATCAAGGCAGAATTGATGGGAAAACATTTCTTGTGTCGTACTGCTGCTAGTTTTGTTTCTGCCCGTATTGGAATCATCTCTAAGCCTCCAGTATTGCCAAAGGATCTAGGAATAGCTAGAGAAAGGAATGGCGGTTTGATAGTTGTGGGATCATATGTTCCAAAAACGACAAAGCAGGTTGAAGAGCTTAAATTACAGTGTGGTCATTTCTTAAGAAACATTGAGGTATCAGTTGAAAAACTTGCAATGAGGCCTATTGAGGAGAGGGAGGAGGAAATCAGTAGAGCAGCTGAATTAGCAGATGTTTATCTTAAAGCTCATAAAGACACTCTTATAATGACCAGTCGAAATCTCATAACCGGAAAAACTGCCTCTGAGAGTTTGGACATTAACTTTAAAGTGAGTTCTGCTTTGGTGGAAATAGTGAAAAGAATAACTACAAAACCTCGCTATATAATTGCAAAGGGTGGTATTACTTCTTCAGACCTTGCTACAAAAGCCCTTGGTGCAAGATGTGCCAAGATTGTTGGACAAGCACTTGCCGGTATTCCCTTGTGGCAATTAGGCCCTGAAAGTAGACTTCCTGGAGTTCCTTACATTGTCTTCCCTGGTAATGTTGGTGACAGCAAAGCATTGGCAGAAGTGGTGAAGTCCTGGACTCGTCCAATCAGACTTTCATCAACAAAAGAGATTCTTAATAATGCAGAAAAGGGTGGATATGCTGTTGGAGCATTTAACATCTATAATTTGGAAGGAGTTGACGCTGTTGTTTCTGCTGCAGAGGAAGAACAAAGTCCTGCTATATTACAGATTCATCCTGGTGCCTTGAAGCAAGGAGGAATTCCCTTGGTTGCTTGTTGCGTTTCTGCTGCAGAGCAAGCCAGTGTTCCCATTACTGTTCACTTTGATCATGGAACTTTAAAGCAAGATCTTGTCGAAGCTCTTGAGCTGGGATTCAATTCTGTGATGGTAGATGGTTCCCATCTGTCTTTCGATGAAAATGTTGCATACACAAAATTTATATCATTATTGGCTCACTCAAAAGATATGTTGGTTGAAGCTGAGCTAGGAAGATTGTCAGGGACAGAAGATGATTTGACTGTCGAAGAATATGAAGCCAGGCTAACAGATGTTAATATGGCAGAAAAATTCATTGATGAGACTGGCATAGATGCTTTGGCAGTGTGTATTGGTAATGTGCATGGAAAGTACCCTGCAAGTGGTCCAAATCTCAGATTAGATTTGCTTAAGGAGCTGCATGCTTTGAGCATGAAGAAAGGAGTTTTTCTGGTGCTTCATGGTGCGTCTGGTTTGGGCAAAGAACTTGTTAAGGAATGCATAAATCTTGGTGTTAGAAAGTTCAATGTCAACACTGAAGTAAGGAAGGCATACATGGACTCCCTCACTACTCCCAAGAAAGATCTAGTTCATGTTATGGCTTCTGCAAAGGAAGCCATGAAAGCTGTGGTTGCAGAAAAGATGCATCTCTTTGGTTCAGCAGGAAAGGCATAA 4242 0.4147 MESGKVIGFIGLDDLGLEMASSLVRHGYRVQAFEISDPIIKELVKLGGITCSSPSEAGRGVAAIVVLLSHVDQINDLIFGDEGALKGLKPETVLILRSTILPSVLCKLEKDLEEVHKIAYVVDAYVSYGRSDAWNGKVTIASSGRSDSIARVRPILSAMCEKLFTFEDEIGGGSKVKMVAEMLEGIHFIASVEALSLGAKVGIHPWIIYDIISNAAGNSWIFKNNVPLLLKGEVKHQILNSFVKELETILDMAKSLTFPLPLLAATHQQLIHGVSHVCHQDDNDTALIKVWEKVYGVKISDAANADTYNPEQLASEFTTDSKSGRRVGFIGLGAMGFGMATHLLSSSFTVVGYDVYEPTLIRFANAGGLIENSPAEVGKDVDILIIMVANEAQAENALYGEYGAVSVLPPGVTIILSSTVSPAYVRQLEHRLHNDAKKLKLVDAPVSGGVKRASMGTLTIMASGTDDALKSAGLVLAALSEKLYVIKGGCGSGSGTKMVNQLLAGVHIASAAEAMAFAARLGLNTRLLFDFITNSGGTSWMFENRVPHMLNNDYTPYSALDIFVKDMGIVTRESSSWKVPLHLSTVAHQLYLSGSAAGWGRKDDAGVVKTKKQNNITTEYQSIDASKSESFSETSVSDKSSYTSSVYETLTGVRVEGKLQALKKDVMLHSLPPEWPQDHVLDIQKLTENSSKILVVLDDDPTGTQTVHDIEVLTEWTIDSLIEQFRKSPKCFFILTNSRSLSSDKASVLIKEICRNLDTASKSVDNIDYTVVLRGDSTLRGHFPEEPDAVISVLGEMDAWIICPFFLQGGRYTIDDIHFVADSDVLVPAGDTEFAKDAAFGYKSSNLCDWVEEKTNGRILASSVVSISINLLRKGGPDAVCQHLCSVQKGSVCIVNAASERDMAVFALGMIKAELMGKHFLCRTAASFVSARIGIISKPPVLPKDLGIARERNGGLIVVGSYVPKTTKQVEELKLQCGHFLRNIEVSVEKLAMRPIEEREEEISRAAELADVYLKAHKDTLIMTSRNLITGKTASESLDINFKVSSALVEIVKRITTKPRYIIAKGGITSSDLATKALGARCAKIVGQALAGIPLWQLGPESRLPGVPYIVFPGNVGDSKALAEVVKSWTRPIRLSSTKEILNNAEKGGYAVGAFNIYNLEGVDAVVSAAEEEQSPAILQIHPGALKQGGIPLVACCVSAAEQASVPITVHFDHGTLKQDLVEALELGFNSVMVDGSHLSFDENVAYTKFISLLAHSKDMLVEAELGRLSGTEDDLTVEEYEARLTDVNMAEKFIDETGIDALAVCIGNVHGKYPASGPNLRLDLLKELHALSMKKGVFLVLHGASGLGKELVKECINLGVRKFNVNTEVRKAYMDSLTTPKKDLVHVMASAKEAMKAVVAEKMHLFGSAGKA* 1414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00369 1413 Gene3D - 2 169 - -
Rops5g00369 1413 Gene3D - 321 487 - -
Rops5g00369 1413 Pfam NAD binding domain of 6-phosphogluconate dehydrogenase 7 164 IPR006115 GO:0050661
Rops5g00369 1413 Pfam NAD binding domain of 6-phosphogluconate dehydrogenase 326 484 IPR006115 GO:0050661
Rops5g00369 1413 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 490 611 IPR008927 -
Rops5g00369 1413 Gene3D - 947 1128 IPR042213 -
Rops5g00369 1413 ProSitePatterns 3-hydroxyisobutyrate dehydrogenase signature. 329 342 IPR002204 GO:0016491
Rops5g00369 1413 Gene3D - 171 296 IPR013328 GO:0016491
Rops5g00369 1413 Pfam Sugar-binding N-terminal domain 694 931 IPR010737 -
Rops5g00369 1413 PANTHER 3-HYDROXYISOBUTYRATE DEHYDROGENASE-LIKE 1, MITOCHONDRIAL-RELATED 320 615 - -
Rops5g00369 1413 Pfam NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 171 290 IPR029154 GO:0051287
Rops5g00369 1413 Pfam NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 491 609 IPR029154 GO:0051287
Rops5g00369 1413 Gene3D Aldolase class I 1129 1413 IPR013785 -
Rops5g00369 1413 SUPERFAMILY YgbK-like 694 1126 - -
Rops5g00369 1413 Pfam Fructose-bisphosphate aldolase class-II 1137 1412 IPR000771 GO:0005975|GO:0008270|GO:0016832
Rops5g00369 1413 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 170 298 IPR008927 -
Rops5g00369 1413 Gene3D - 488 617 IPR013328 GO:0016491
Rops5g00369 1413 NCBIfam ketose-bisphosphate aldolase 1135 1413 IPR000771 GO:0005975|GO:0008270|GO:0016832
Rops5g00369 1413 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 163 IPR036291 -
Rops5g00369 1413 SUPERFAMILY Aldolase 1136 1413 - -
Rops5g00369 1413 CDD TBP_aldolase_IIB 1138 1411 IPR000771 GO:0005975|GO:0008270|GO:0016832
Rops5g00369 1413 Gene3D - 693 931 IPR037051 -
Rops5g00369 1413 Pfam Nucleotide-binding C-terminal domain 956 1122 IPR031475 -
Rops5g00369 1413 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 326 483 IPR036291 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00369 - - gmx:100779987 2338.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops5g00369 5 6404271 6431366 Rops5g00369 5 6404271 6431366 ECH