Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00358 ATGACCAAGAGATCACCTCAAGTCACAATTTTTTCCGGCGTCGGCACCGGAAATGGTGCACATCCGTCCGAAAGTTGTGTCAATGAAGCTCGTGATACTCGAAATGGCTTTGACCGCCATTCTCTGGTTATGCATGTCTTGGATCCATCGTGTGCCACCACTGATGAACCTCGATATAAGATTTGTGATATCGGAAATGGATATGATCGTAGGTTCCAGATTCCTCAGGATCTACCCCGGGAGCTAACAGAAGAATGGGAATTACAGTATGTCCTAGAAGATGTTCTAGCTTTGTGTTACAGCAAGCAGGGTGCAGCTGAAGTGCTTGTTAAGTGGAAGGGCTGCCCAGATTTTGACAACTCATGGGAAGATTTGACTCAGCTGCAGCTCCAATTTCCTGCTTTTCACCTTGAAGACAAGGTGAAAGCTTTAAGTGGGATTGTTGATAGGGACCCAATAATCAAGAGAGTTTCAGTTAGAAGAGAAAGGCCCAATAAGGAGGCCGAAAACCAATTTTGGGTTGATGAGGATTTGTTTTGTGTGCTGATATTGAACATGTTTGGAACTGCTTCTGAAGCACTCAAGTCCACGGACTACATGATGAGCAATATGAAGTTGAGGCACAAAGTGGCCGCGAAGTGTATTATAATGCCAGTCTTGTATGTTATGTGTAAGTTGGACATGCTGAATCATATCTACACTGATGGACATGCTGCTCTTCATGAGGCTGCAGAAACATTGGTAAATGCTCTGAATGGCCGGGAGTTTCTTGGAGGGTCTAAGCCTAACAAAGGTGACATGGCTGTATTTGGGGCTTTAAGAGCCATACGCAGTTTGACGTGTGGCAAGGAATTGGTGGAGCACACTCAGATTGGTGAGTGGTACACAAGAATGGAGAATGCTGTGGGAAAGTCTTCTAGGATTGAAGTCTAA 933 0.4491 MTKRSPQVTIFSGVGTGNGAHPSESCVNEARDTRNGFDRHSLVMHVLDPSCATTDEPRYKICDIGNGYDRRFQIPQDLPRELTEEWELQYVLEDVLALCYSKQGAAEVLVKWKGCPDFDNSWEDLTQLQLQFPAFHLEDKVKALSGIVDRDPIIKRVSVRRERPNKEAENQFWVDEDLFCVLILNMFGTASEALKSTDYMMSNMKLRHKVAAKCIIMPVLYVMCKLDMLNHIYTDGHAALHEAAETLVNALNGREFLGGSKPNKGDMAVFGALRAIRSLTCGKELVEHTQIGEWYTRMENAVGKSSRIEV* 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00358 310 Pfam Chromo (CHRromatin Organisation MOdifier) domain 91 133 IPR023780 -
Rops5g00358 310 SUPERFAMILY GST C-terminal domain-like 164 302 IPR036282 -
Rops5g00358 310 Gene3D - 160 308 - -
Rops5g00358 310 PANTHER MICROSOMAL PROSTAGLANDIN E SYNTHASE-2 163 309 - -
Rops5g00358 310 Gene3D - 83 136 - -
Rops5g00358 310 SUPERFAMILY Chromo domain-like 76 129 IPR016197 -
Rops5g00358 310 ProSiteProfiles Chromo and chromo shadow domain profile. 90 133 IPR000953 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00358 Rops-Chr5 6274923 6279943 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00358 K05309 - vvi:100266342 146.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops5g00358 5 6274923 6279943 Rops5g00358 5 6274923 6279943 ECH