Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00307 ATGTCGCTCCCCGGCGACGGTTTAAGTGACCGCCGGGAGGTTCTGACTCCGGCGACGGTGAACGCCGGAGGAAACGGCGTCGTGGTGGCGTCGAGCCAGAGGCTGAGGTTGAACCCGAACAAGGAGCATAAACCAGATGGGTATGAAGATCTTGAATTGGATTTCAACCCTTCAATTTTCAGTTCCTTGGAGAGGCACCTTCCTCCGAACATGCTTGGAGTGCCTCGTGATGACAAGGCCAAGTTCATGCGTGAGATTTTGCTCAAGTATCTGCCCCTTGGAGAACGCAACAGAGCTCAGAAGCATAGAGAATACAGGCAGAAGATAATATCAAATTATCTGCCTCTACATCGGGAGTTGTACACTATGAATCCTACTACATTCTTTATCCCAGCATTTCTGAAAGCAATTAATGATAACAAAGAGCAAAGCTTCAGAAGTATAACGTCTGAGCCCTCTCCAGGCATTTTTGTATTTGACATGTTTCAGCCACGCTTTTGTGAGTTATTGCTAGCTGAGATTGAAAATTTTGAGAAATGGGTGACTGAAACAAAATTTCGGATCATGCGTCCCAATACAATGAATAAATATGGTGCTGTACTTGATGACTTTGGCCTTGAAACGATGCTTGACAAGCTTATGGATGGTTTTATTCGTCCTTTATCCAAAGTCTTCTTTGCGGAAGTTGGTGGATCATCCCTGGATTCTCATCATGGATTTGTTGTTGAATATGGGAAAGATAGAGATGTTGACTTGGGTTTCCATGTGGATGACTCAGAAGTAACCTTGAATGTTTGCTTGGGTAAGCAATTTTCTGGAGGGGAATTGTTTTTTCGGGGTACCCGATGTGAGAAACATGTAAATACAGGAAGTCAATCAGAGGAGATCTTTGATTATTCCCATGTCGCTGGACGAGCTGTGCTTCATCGAGGTCGTCATCGCCATGGTGCTAGAGCTACAACATCTGGCCATCGGGTCAACCTACTTCTCTGGTGCAGAAGTTCTGTCTTTAGAGAGATGAAACGGTATCAAAAAGATTTCTCCAGCTGGTGTGGTGAGTGCGATCGTGTAAAAAAGGAAAAGCAGCGCTCCACAATTGCTTCTACCAAATTGGAATTGTTCAGGAGGGAAGGTGAATCCACTGCATAA 1149 0.4491 MSLPGDGLSDRREVLTPATVNAGGNGVVVASSQRLRLNPNKEHKPDGYEDLELDFNPSIFSSLERHLPPNMLGVPRDDKAKFMREILLKYLPLGERNRAQKHREYRQKIISNYLPLHRELYTMNPTTFFIPAFLKAINDNKEQSFRSITSEPSPGIFVFDMFQPRFCELLLAEIENFEKWVTETKFRIMRPNTMNKYGAVLDDFGLETMLDKLMDGFIRPLSKVFFAEVGGSSLDSHHGFVVEYGKDRDVDLGFHVDDSEVTLNVCLGKQFSGGELFFRGTRCEKHVNTGSQSEEIFDYSHVAGRAVLHRGRHRHGARATTSGHRVNLLLWCRSSVFREMKRYQKDFSSWCGECDRVKKEKQRSTIASTKLELFRREGESTA* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00307 382 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 235 334 IPR005123 -
Rops5g00307 382 Gene3D q2cbj1_9rhob like domain 154 334 - -
Rops5g00307 382 PANTHER 2-OXOGLUTARATE AND IRON-DEPENDENT OXYGENASE DOMAIN-CONTAINING PROTEIN 2 31 370 - -
Rops5g00307 382 SMART p4hc 154 333 IPR006620 GO:0005506|GO:0016705|GO:0031418
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00307 Rops-Chr5 5242057 5247664 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00307 - - qsu:111987273 647.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops5g00307 5 5242057 5247664 Rops2g00102 2 1550894 1559988 ECH
Rops5g00307 5 5242057 5247664 Rops5g00307 5 5242057 5247664 ECH
Rops2g00102 2 1550894 1559988 Rops5g00307 5 5242057 5247664 PCT