Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00291 ATGATTCTTAATGACATTGGCGCCGGGTTTTGTTTTATCCACTTGCCACGACCCGACCCGAAACATGAAATCCGAATTTCTAGCTGGCTTTTTCGCCTCAGGCGGTCACCGCCGCCGTCTCCAGCGAGGCCTGCGGCGTTTCACGGTGCGCATATGGAGAGGGAAAACAACAAGCGCCGATCGATATGCACCGCCGATGAGCTTCACCGTGTCTCTGTTTCAAACTCCGATTGGAGACTCGCTCTATGGCGCTACCTTCCTTCTCCAAAGGCCCCTCTGAGGAATCACCCACTTTTGTTATTGTCTGGGGTTGCAACCAATGCTGTTGGCTATGATCTCTCTCCTGAGTCTTCTTTTGCTCGGTACATGTCGGCGCAAGGATTTGATACATGGACTCTTGAGGTTCGAGGTGCTGGGCTGAGCACACATGGAGACAACTTGGAGGAAGATGAGAAGAGCCTCAAGAATTTGTATGGGATAGATTCAGCAATCAATGATGGGAAAGGCAGTGCTTCTTCTGCAAGAGCATTGGGATTTAAGAACCTTGGTGTTTCTTTTGAATCAGAAGTTCCTCACCTGAAAAAGAGAGGATCAAAGGTAGTAACAAAATACGAGGAACTACGGCTAAAAACGAGGTTGATGGAGATTTTTACAAGGATATCTGACAGGCTTGCAGGCTTTCTCAGTGATGATTTGTTGGAAGGAGGACAAAACTCAGCAACTGTTAGTCGAATCAAGGGTTTCAATGAGAGACTTCGAACTATTATTGAAGGTCAACAATTTTTCCCAGCACAGATTTTAGAGTTGCAAGACCGTTTTACTGCCACTTTAGAAGGATTTCAGAAACAGCTTGAGCTGATTGTCAAGCATGATTGGGACTTTGACCATTATCTGGAAGAGGATATACCAGCCGCGATGGAGTACATAAAGGCTCAATGCCAACCAAAGGATGGAAAATTGCTGGCAATTGGTCACTCAATGGGGGGTATCTTGTTGTATGCAAGGCTCTCACGTTGTTGTTTTGATGGAAAAGATTCTGGGTTGGCATCAGCTGTTACTTTGGCATCATCACTTGACTATACACCTTCAAGATCATCACTCAAGTTGCTCTTACCCCTGGCAAAACCTGTTCAGGCTTTAAACATTCCTATTATTCCGGTTGGACCATTGATTGCTACTGCTTATCCTCTTGCCAACAATCCTCCGTTTCTTTTATCTTGGCTAAATTCTCAGATTTCAGCTCAAGACATGATGGATCAAAAGTTGTTTGAGAAGCTTGTTTTGAACAACTTCTGTACCATACCTTCCAAACTTCTCTTGCAGTTAAGGACAGTCTTCCAGAAAGGAGGTTTACGTGACAGGAGTGGAACATTCTTGTACAAGGACCATCTCAGCAAAAGTAAAGTTCCTGTTTTAGCAATTGCTGGTGACCAAGACTTAATCTGCCCCCCTGAAGCTGTATATGAAACAGTGAAGCTTATTCCTGAGGAACTAGTTACATATAAAGTCTTTGGAGAGTCTGGAGGTCCACACTATGCTCATTATGACTTAGTGGGTGGTCGTTTGGCAGCAGATCAACTGTATCCATGTATAACCGAATTTCTCATTCATCATGACATGGCTTAA 1626 0.4446 MILNDIGAGFCFIHLPRPDPKHEIRISSWLFRLRRSPPPSPARPAAFHGAHMERENNKRRSICTADELHRVSVSNSDWRLALWRYLPSPKAPLRNHPLLLLSGVATNAVGYDLSPESSFARYMSAQGFDTWTLEVRGAGLSTHGDNLEEDEKSLKNLYGIDSAINDGKGSASSARALGFKNLGVSFESEVPHLKKRGSKVVTKYEELRLKTRLMEIFTRISDRLAGFLSDDLLEGGQNSATVSRIKGFNERLRTIIEGQQFFPAQILELQDRFTATLEGFQKQLELIVKHDWDFDHYLEEDIPAAMEYIKAQCQPKDGKLLAIGHSMGGILLYARLSRCCFDGKDSGLASAVTLASSLDYTPSRSSLKLLLPLAKPVQALNIPIIPVGPLIATAYPLANNPPFLLSWLNSQISAQDMMDQKLFEKLVLNNFCTIPSKLLLQLRTVFQKGGLRDRSGTFLYKDHLSKSKVPVLAIAGDQDLICPPEAVYETVKLIPEELVTYKVFGESGGPHYAHYDLVGGRLAADQLYPCITEFLIHHDMA* 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00291 541 PIRSF UCP031088_abhydr 28 541 IPR016969 -
Rops5g00291 541 FunFam Alpha/beta hydrolase family protein 67 158 - -
Rops5g00291 541 FunFam Alpha/beta hydrolase family protein 285 537 - -
Rops5g00291 541 SUPERFAMILY alpha/beta-Hydrolases 70 535 IPR029058 -
Rops5g00291 541 Gene3D alpha/beta hydrolase 285 536 IPR029058 -
Rops5g00291 541 Gene3D alpha/beta hydrolase 66 166 IPR029058 -
Rops5g00291 541 PANTHER LYSOSOMAL ACID LIPASE-RELATED 73 535 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00291 Rops-Chr5 4493231 4498280 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00291 - - gmx:100808317 858.981
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops5g00291 5 4493231 4498280 Rops5g00291 5 4493231 4498280 ECH