Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00287 ATGGCGCACAATACATCATCTGATTCAGATAATGAAATTACCACAACACGGACAAAGCTCTTTCAACATGAAAAACCTATACATGAAATTCTTGGAGGTGGAAAAGTGGCAGATGTATTATTATGGAATAACAGAAATGTGTCAGCTGCACTTTTGCTTGGGATGACAGTTATATGGTTTCTGTTTGAGATCATTGAGTACAATTTCGTGACTCTCATTTGTCATATTTTCATCACCACGATGCTTGTACTATTCATATGGTCCACGGTTGCAGATATATTAAAATGGAATGGACCCAAAGTCCCTGAAATTATTTTACAGGATTCTTTCTTCCAAGATCTTGCTTCCATCCTCCAAAGAAGATTTAACCAGTTATTACCAATGCTTCTCTATATTTCATGTGGAACAGACCTACCACTCTTTCTTCTGATCATTGTGTCACTCTGTATATTCTCAGTGATTGGAACCTACTTCAGCTTTGTTAATCTACTTTACATTGGTTTTCTCTGCATGCTAACATTGCCATTAGTGTATGAACGGTATGAGGAAGAAATTAACAATCTGGGCCTACCCTCAAGCACACACCAAGAAGCAAAGGAGGAGGGACAAATGGTGAGAGAATGGAGAGAGGTGAACAATTTGGATGCAAATCTTGGTTTCTTTACTAATGCCTATGCAATCTTGTGGGTGGTTTTGGTTACCTTTTGCATTATCTCAGCAATTATCTTTTCTTGTGCTGATGGAATATCCAAAGAGAAAACTTCTGCAGCAGATCAAGAGCCTTACGGAGCTGGATGTGCTGCTGGATGTGCTACTGCATGTGGAGCATGA 831 0.3911 MAHNTSSDSDNEITTTRTKLFQHEKPIHEILGGGKVADVLLWNNRNVSAALLLGMTVIWFLFEIIEYNFVTLICHIFITTMLVLFIWSTVADILKWNGPKVPEIILQDSFFQDLASILQRRFNQLLPMLLYISCGTDLPLFLLIIVSLCIFSVIGTYFSFVNLLYIGFLCMLTLPLVYERYEEEINNLGLPSSTHQEAKEEGQMVREWREVNNLDANLGFFTNAYAILWVVLVTFCIISAIIFSCADGISKEKTSAADQEPYGAGCAAGCATACGA* 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00287 276 Pfam Reticulon 36 187 IPR003388 -
Rops5g00287 276 PANTHER RETICULON 13 200 - -
Rops5g00287 276 ProSiteProfiles Reticulon domain profile. 36 207 IPR003388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00287 Rops-Chr5 4439109 4443941 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00287 - - gmx:100809028 310.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops5g00287 5 4439109 4443941 Rops5g00287 5 4439109 4443941 ECH