Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00252 ATGATCATGAAGAATAAGGAGCAACAAGGGACAAGTGTAGTCTCATATCTTAAGCTTTACAGTGCTCAACTCTATCTACTCAATTTCTTTGGTCATGTTTTGGTCTTTGGTTGTGGTTTACTCATTGGTATTACTCTCTCTTTCTGTGTCAAGAATTTCTCCTTCAACTTTCAAATCCAACAATTCTCATCCCTTAACCTCAAACCACCACTGCCACCTTTATCTCCCTCTCCACCTATCTCATCAAATAAAATCTCAATATCAAATGATAACCACACAAAACTTTCTTCACCCCAGATGATCAATCAGAAAAGGGTGATCAACAACCTCACCAGAATTGGGTTGAGTGATTTTTTGAAACCTCCCATGACAAGGCATGATATGAATGAGGAAGAGTTGTTTTGGAGAGCCTCTATGGTTCCCTTGATTCATAAATTACCATTCAAACAGACCCCAAAGGTTGCATTTTTGTTCTTGATTAAAGGTCCTGTGCTGTTGGCTCCTCTATGGGAAAGATTCTTCAAGGGAAATGAAGGGTTGTTTTCTATCTATGTCCATTCACACCCTTCTTTCAATAAAACAGTGCCTGAGAGTTCTGTGTTTCATGGCCGCAGAATCCCCAGCAAGGAAGTAAAATGGGGTGAAAATAGCATGATAGAAGCAGAGAGACGTCTATTAGCAAATGCACTGCTAGATTTCTCCAACCAACGTTTTGTACTACTCTCAGAATCATGCATACCTTTGTTTAATTTCTCAACCATCTACACTTATCTAGTGAACTCAAAAAATACCTTTGTTGAAGCCTATGATTTACCAGGGGCAGTGGGGCGTGGCAGGTACAACCCAAAAATGAGGCCACTTATTAAGCTTTCCCAATGGAGAAAGGGCTCTCAATGGTTTCAAATAGACCGTGCACTTGCCCTTCAAATAGTCTCTGACCAATACTATTTCCCTATGTTCAAGAAGTATTGCAATTCTCAATGCTATAGTGATGAGCACTACTTGCCCACATTGGTTAGTATCAAATTTTGGAAGAGGAACTCTAATAGAACTTTGACATGGGTTGATTGGTCAAGGGGTGGACCTCATCCATCAAAGTATATCAGAACAGATGTGACTGTTGATTTTTTGAAGAGGTTAAGGTATGGAAGCTCATGTGAGTACAATGGAAGGACCACCAATGTTTGTCATTTGTTTGCAAGAAAATTCACGCCTCATGCTTTGGATAGATTGCTGAGACTTGCTCCAAAGTTAATGCAATTCAATTGA 1269 0.3972 MIMKNKEQQGTSVVSYLKLYSAQLYLLNFFGHVLVFGCGLLIGITLSFCVKNFSFNFQIQQFSSLNLKPPLPPLSPSPPISSNKISISNDNHTKLSSPQMINQKRVINNLTRIGLSDFLKPPMTRHDMNEEELFWRASMVPLIHKLPFKQTPKVAFLFLIKGPVLLAPLWERFFKGNEGLFSIYVHSHPSFNKTVPESSVFHGRRIPSKEVKWGENSMIEAERRLLANALLDFSNQRFVLLSESCIPLFNFSTIYTYLVNSKNTFVEAYDLPGAVGRGRYNPKMRPLIKLSQWRKGSQWFQIDRALALQIVSDQYYFPMFKKYCNSQCYSDEHYLPTLVSIKFWKRNSNRTLTWVDWSRGGPHPSKYIRTDVTVDFLKRLRYGSSCEYNGRTTNVCHLFARKFTPHALDRLLRLAPKLMQFN* 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00252 422 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 67 412 IPR044174 GO:0016757
Rops5g00252 422 Pfam Core-2/I-Branching enzyme 154 380 IPR003406 GO:0016020|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00252 Rops-Chr5 3919722 3922725 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00252 - - gmx:100791882 629.402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops5g00252 5 3919722 3922725 Rops5g00252 5 3919722 3922725 ECH
Rops5g00252 5 3919722 3922725 Rops5g00252 5 3919722 3922725 PCT