Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00242 ATGGCTGTAGCTGGCAAAACTAGAAATATGCTTGAAGGTCTGGTAAAAGAAGGATCATTTAAATGGTTGCTTGGCAAGAAGAGCTACTTTGATGAAGAATTTGAGGAGATGGAAAATTCACCTTCTGCTGGGAGGAATTTTATACCAGAGCTCTCTCCGGTTGCGAACCTAGTTGTTCGTAGATGCTCAAAAATCCTTAAGATCTCTTCCAGTGAGCTTCAGGAGAGCTTCAATCAAGAGGCTTCTGATTCTCTAAAGCATCCATCACGATATGCAAGGAACTTATTGGAATATTGCTGTTTCAAAGCACTTTCCTTGACAACACAAATGACTGGTCATCTCTTTGATAAAACGTTCCGGCGCTTGACATATGACATGATGTTAGCTTGGGAGGCCCCGGCTGCTACCAGCCAACCTTTAACTAATAAGGTCGATGAGGATGTATCTGTTTGTTTAGAAGCTTTCTGTCGAATAGCTCCTGCAATTCCTATCATTGCCAATGTCATCACTAGTGAAAATCTTTTTGAGGTGCTGAGTTTATCAACTGGTGGTCGCCTTCAGTTCCCCATTTATGACAAGTACCTCAGTGGCCTAGAAAGAGCAATAAAAAAAATGAAGAGCAATTCAGAATCGTCTCTCCTTTCTGCTATAAGATCCTCTAGAGGTGAGAAGATTCTTGAGCTTGATGGAACCGTCACCACCCAGCCAGTCCTTGAGCATGTGGGAATATCCATCTGGCCTGGGAGGTTAATCCTGACAGATCATGCACTTTATTTTGAAGCACTTCGAGTTGTATCATTTGACAAACCAAAAAGATATGATTTATCAGACGATCTAAACCAAGTTGTTAAACCTGAGTTAACTGGACCTTGGGGTACTCGACTTTTTGACAAGGCAGTCTTCTATAGCTCAGTATCCTTATCAGAACCAGTTGTACTAGAATTTCCAGAGCTTAAAGGTCATGCTCGTCGTGATTATTGGCTAGCTATCATCCAAGAGATTCTTTGTGTTCACAAATTCATAAGGAAGTATGGAATTAAAGGGGTTGCACGGGATGAAGCAATTTGGAAGGCTGTTTTAGGAATTCTGCGTTTACAAGCCATCCAAGATATTAGTTCTACAGTCCCAATACAGAATGATTCTCTTCTAGTGTTTAATTTATGTGATCAGCTTCCAGGTGGAGACTTGATATTAGAAACCCTTGCAAATATGTCAAGCTTAAGGGAGTCAGATCATGACAATGATTTCAAGTCTAGAAGTGGAATGTATTCTATCTCAGTCTCAGACATGGTTTCTAACTTGGGATTTGTATTTGGAACAAGTTCAAACAGCTCAAATGAGAGCAGCATTGCTGTGGGTGAAATATCTGTTGGAGAAATGACTTCATTGGAAAGAGTAGTTAAAGAATCTAAGAACAATTATAAAAAGGTCATATCTGCACAAGCGACAGTTGATGGTGTTAAAGTTGATGGTATTGACACTAATTTGGCTGTCATGAAGGAGTTACTTTTTCCTCTAAGTGAACTTTGGAAGTCTCTTCAATCTTTGGCATATTGGGATGATCCATGGAGGTCTTCCGGGTTTTGTTTGTTCTTCAGTTACATCATCTGGAGGGGTTGGCTTGGTTATGCAGTGACACTTGTGCTTGTGTTACTTGCAGCTTTTATGATAATTACAAGATGTTTTAGCCAAGGTAAGACTGTTCCTGAAATTAAAGTAATAGCCCCTCCACCAATGAATACAATGGAACAACTTTTGGCTGTTCAGAATGCTGTCTCTCAAGCTGAACAGCTCATACAAGATGGTAACGTAATTCTGCTCAAGTTCCGTGGCTTGTTGATGTCCATTTTTCCTCAGGCCACAGAGAAGTTGGCATTTGGTCTTCTATCAACAGCCTTGATTTTGGCTTTCTTGCCTAGTAAATACATAGTTCTGCTAGTGTTCTTGCAAATATTTACAATGTATTCACCTCCAATGAGGGCTAGCACAGAGAGATGGAAGAGGAGATTGAAAGAATGGTGGTTCAGCATACCAGCAGCTCCTGTTACACTTGAAAGAGATAAAGAGGAAAAGAAGATAAAGTGA 2085 0.4034 MAVAGKTRNMLEGLVKEGSFKWLLGKKSYFDEEFEEMENSPSAGRNFIPELSPVANLVVRRCSKILKISSSELQESFNQEASDSLKHPSRYARNLLEYCCFKALSLTTQMTGHLFDKTFRRLTYDMMLAWEAPAATSQPLTNKVDEDVSVCLEAFCRIAPAIPIIANVITSENLFEVLSLSTGGRLQFPIYDKYLSGLERAIKKMKSNSESSLLSAIRSSRGEKILELDGTVTTQPVLEHVGISIWPGRLILTDHALYFEALRVVSFDKPKRYDLSDDLNQVVKPELTGPWGTRLFDKAVFYSSVSLSEPVVLEFPELKGHARRDYWLAIIQEILCVHKFIRKYGIKGVARDEAIWKAVLGILRLQAIQDISSTVPIQNDSLLVFNLCDQLPGGDLILETLANMSSLRESDHDNDFKSRSGMYSISVSDMVSNLGFVFGTSSNSSNESSIAVGEISVGEMTSLERVVKESKNNYKKVISAQATVDGVKVDGIDTNLAVMKELLFPLSELWKSLQSLAYWDDPWRSSGFCLFFSYIIWRGWLGYAVTLVLVLLAAFMIITRCFSQGKTVPEIKVIAPPPMNTMEQLLAVQNAVSQAEQLIQDGNVILLKFRGLLMSIFPQATEKLAFGLLSTALILAFLPSKYIVLLVFLQIFTMYSPPMRASTERWKRRLKEWWFSIPAAPVTLERDKEEKKIK* 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00242 694 Pfam Plant protein of unknown function (DUF639) 460 688 IPR006927 -
Rops5g00242 694 PANTHER HEAT-INDUCIBLE TRANSCRIPTION REPRESSOR (DUF639)-RELATED 5 690 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00242 Rops-Chr5 3690821 3697657 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00242 - - gmx:100803163 1165.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops5g00242 5 3690821 3697657 Rops5g00242 5 3690821 3697657 ECH