Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00234 ATGTTATTATGTCACCAAAGCAACCAAGGTCACTTTTTGTTGGAGTTGCTTTGCTTAGTGGTGGAGTCCCTTAGGAGTTCAATTTGGAGCAAACCACACAAAAAAATGCCATGTTCTAAAGAAGAAGCTCTTGTTAGACTCTTCTACAATGCTTCAAGCTCTTTCCATCTTCTCTTCCTCTTCCTCTTCTCCTCTTCCATTTTGTTTGTCAAGTTCTTAAACTTCATTGGCAGCTACTCCATATTCCAAAGAGATCAGCACTATGAATATGTGTCTTCTGAGTATGATGAAGAAGAAGAAATTCAAGAAAGTTATTCTTATGTGGATTCTATTGAGAGAGATCATTTAGTAGCAGACATCATTTGTGGTGGAGAAACCCTTTTGTTTCTACACAACAATGAGCCTCAAAGGACTCATTCTTCCTCTGAAGAATTCATAAGCCCCCAAGATAGCATAATTGAAGACTCAGAAGAAAACTATTCCACAGAAACTTTTTCTGTTCATAAGTCACCACTTGTTTCAGACTTTGAAAATGAAGAGGCAGAAGCAGAAGCTGAAGAAGAAGAATTTCCATCACAAGATGCTGATTCTGTTCCAAATTCTGTCCCAAATGAAAGCAGGCCCACTTCTCCCATCACACTGAACCTATACAAAAGTGACTTGGTGGACAGTGACAAAAACTATGACGAAGAAGATCATGTTGATATTGAAGTTATTAAAGACAAGAAGGTGCATGAGGCAAACCTCACAAAAGATGAGAGCTTCTTTGTCATTGCTCCTACCCAATTGGAGACTAAGAAGTTGATTATTGAAGAAAAGGATGATGAAGAAATATATGGTGACTCATGCACTGTTGGGTCAACATCTAAGAGCTCCTCTGAATGGAGGAGCTCTATTAATTGCAGGGATTCTGGGACTGAAGACCCTTTTTCTTCTTCATCAAGAAGAAGTTGCCCCAAGTGGGAATCATACACAGTTTTCCAAAAATATGATGAAGAAATGTCATTCCTTGACAGGATTAGTGCACAGAAACTTCATGAAACTGAGTCTTTAAGATCTATCAAAGTATCTCCAAGATCAATTTCAGAGCGTATTGTGTTCAAGTTTTCAACAAAGCCAGCTGATATACGTCACAACCCATATCGTGAATTGGAGGCTGCATATGTTGCACAAATTTGCTTAACATGGGAGGCACTTAATTGGAACTACAAAAATTTTCAATCCAAGAGAGCTTCAAGGCATGATGTTGATGTGGGGTGTCCAGAAACCATTGCACAACAGTTCCAACAATTTCAAGTTTTGTTGCAAAGATATGTAGAGAATGAGCCTTATGAGCATGGTAGGAGACCTGAGATCTATGCTAGAATGAGGCATTTGGCTCCAAAATTGCTCTTGGTTCCAGAATATCGAGAATCAGATGATGATAAGAAGGAGAATAGCTTAAACTCAAAAATATCATCAGCTTCATTTCTTGTGATAATGGAAGATGGGATCAGAACATTCATGAGTTTCTTGAAGGCTGATCAAGAGAAACCATGTCATGTCCTTGCATCCTACTTTAGGAGAAACAAAAGAGCCTTGGTTGATCCAACACTCCTTAGGCTTATGAAGAAAGTTAATCAAAAGAAGAAGATGAAAGTTAAAGATCTTCGCCGCTCTCACAAATGTTTGAGGAAGAGAAAGTTGAAGGTGGAAGAAGAGATGGAGATTTTGATGGCACTCATAGACCTTAAAGTGGTGTCAAGGGTTTTGAGAATGAGTGAGTTAAGTGAAGAAAAATTGCATTGGTGTGAAGAGAAGATGAGCAAAGTGAGAGTCATGGATGGGAAACTTCAAAGAGATTCCAATCCACTTTTCTTCCCTGCACATTGA 1872 0.3873 MLLCHQSNQGHFLLELLCLVVESLRSSIWSKPHKKMPCSKEEALVRLFYNASSSFHLLFLFLFSSSILFVKFLNFIGSYSIFQRDQHYEYVSSEYDEEEEIQESYSYVDSIERDHLVADIICGGETLLFLHNNEPQRTHSSSEEFISPQDSIIEDSEENYSTETFSVHKSPLVSDFENEEAEAEAEEEEFPSQDADSVPNSVPNESRPTSPITLNLYKSDLVDSDKNYDEEDHVDIEVIKDKKVHEANLTKDESFFVIAPTQLETKKLIIEEKDDEEIYGDSCTVGSTSKSSSEWRSSINCRDSGTEDPFSSSSRRSCPKWESYTVFQKYDEEMSFLDRISAQKLHETESLRSIKVSPRSISERIVFKFSTKPADIRHNPYRELEAAYVAQICLTWEALNWNYKNFQSKRASRHDVDVGCPETIAQQFQQFQVLLQRYVENEPYEHGRRPEIYARMRHLAPKLLLVPEYRESDDDKKENSLNSKISSASFLVIMEDGIRTFMSFLKADQEKPCHVLASYFRRNKRALVDPTLLRLMKKVNQKKKMKVKDLRRSHKCLRKRKLKVEEEMEILMALIDLKVVSRVLRMSELSEEKLHWCEEKMSKVRVMDGKLQRDSNPLFFPAH* 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00234 623 MobiDBLite consensus disorder prediction 173 212 - -
Rops5g00234 623 MobiDBLite consensus disorder prediction 282 317 - -
Rops5g00234 623 PANTHER DNA LIGASE (DUF1666)-RELATED 47 623 - -
Rops5g00234 623 MobiDBLite consensus disorder prediction 281 317 - -
Rops5g00234 623 Coils Coil 547 567 - -
Rops5g00234 623 MobiDBLite consensus disorder prediction 177 193 - -
Rops5g00234 623 MobiDBLite consensus disorder prediction 194 212 - -
Rops5g00234 623 Pfam Protein of unknown function (DUF1666) 383 621 IPR012870 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00234 Rops-Chr5 3580236 3583765 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00234 - - gmx:100786564 900.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops5g00234 5 3580236 3583765 Rops5g00234 5 3580236 3583765 ECH
Rops2g00212 2 3191868 3194859 Rops5g00234 5 3580236 3583765 PCT