Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00215 ATGGCTTCAAGGGGACCCAAGTTGGGTTCTTTCCGTCACAGTTTTGCAGAGAAGAAAGAGAGGCTTCTTTCAATGAAGGGTGGTTACTCCCAAATCGGAATCCCTTTACCGGAATCCGATGAAGAGGACCGGTCACCACCGCTGAGAAGGTGCTGCTCCTTCCGTGCTCTCTCCGATGGGATCGTCGGCGCGTGGAAGACGGTGAAGCGCGTGGCAGTGACAGCTTTTGAGATGGGTCGTTCTGATCCAAGGAATATAATATTCTCAGCGAAGATGGGTCTTGCTCTGATCATCATTTCGTTGTTGATTTTCCTTAAAAAACCGTTCGAGGATGTTGGTCGATACTCTGTCTGGGCTATTCTTACTGTCGTTGTCGTCTTCGAATTCAGCATAGGAGCAACTCTTAGCAAAGGACTTAACAGAGGATTGGGGACTTTGTCAGCTGGAGGACTTGCTTTGGCACTGGGAGTGTTATCAAAATTGGCTGGAAAATGGGAAGAAACCATAGTAATGGTTAGCATCTTCATTGTAGGATTTTGTGCCACATATGCAAAGCTATACCCCACAATGAAGGCTTATGAATATGGTTTCCGTGTGTTCTTGATCACCTATTGCTACATTATTGTATCTGGGTATAGAACAGGAGAATTTATTGACACAGCTATAAATAGATTTTTGCTCATTGCAATTGGTGCTGCTGTATCTGTTGGGGTAAATGTATGCATATATCCAATCTGGGCTGGAGAGGATCTACATGATCTTGTGGCAAAAAATTTCATGGGGGTTGCAACATCATTGGAAGGTGTTGTAAAGAACTACCTTAATTGTGTTGAATATGAGAAGGTGCCTTCAAAAATTCTTACATATCAAGCTTCTGATGACATAGTTTACAGTGGCTACAGATCAGCTGTTGAATCTACAAGCAAAGAGGATGCATTGATGGGTTTTGCTGTCTGGGAGCCACCTCATGGTCGTTACAAAATGCTTAGATATCCATGGAAGAATTACGTGAAAGTAAGTGGGGCACTCAGGCATTGCACATTTATGGTCATGGCTATGCATGGATGTATACTTTCTGAAATACAGGCTCCAGCTGAGAAGAGACACGTTTTCCGCAATGAGCTTAAGAAGGTAGGTGCTGAAGGGGCTAAAGTTCTAAGGGAACTTGGGAACAAAGTTAAAAAGATGGAGAAACTAGGCCAGGAAGACATTCTATATGAAGTACATGAGGCAGCAGAAGAATTGCAACAAAAGATTGACAAAAAGTCTTTCCTTCTTGTAAATTCAGAAAGCTGGGAAATTGGAAACAGGCCAAGAAAAGAGGGTGATCTTCAAGACCTCTTGAACATCAATGAAGAAAGACAATTTTTGGAGTACAAGTCTCTTAGTGAAGCAGTGCTTGATCTTAGAGCAGTTAAAGTTCCACCAAGTTGGGGAGGACAAGTTACTCCTGACAATAACCCTGCAATGCCTCAAAATGTTGCTGATGAAAACATGTTCATGAAACAAATATCTTGGCCTGCTCATATTTCCTTTAAAGCAGACGCAGTGACAAAAGAGGAAGAATCAAAGACCTTTGAAAGTGCTAGTTCATTATCTTTGGCAACATTTACATCACATCTGATTGAATTTGTGGCTAGGCTTCAGAACCTTGTGGATGCTTTTGAAGAATTAGGTGAGAAGGCAAAGTTTAAGGACCCTCTTGAACAACAGGCACCAGTAACATCAAGGGGCTGTTGGAATAGGTTGTTTAATTGCTTTAACAAGGATTGA 1773 0.4219 MASRGPKLGSFRHSFAEKKERLLSMKGGYSQIGIPLPESDEEDRSPPLRRCCSFRALSDGIVGAWKTVKRVAVTAFEMGRSDPRNIIFSAKMGLALIIISLLIFLKKPFEDVGRYSVWAILTVVVVFEFSIGATLSKGLNRGLGTLSAGGLALALGVLSKLAGKWEETIVMVSIFIVGFCATYAKLYPTMKAYEYGFRVFLITYCYIIVSGYRTGEFIDTAINRFLLIAIGAAVSVGVNVCIYPIWAGEDLHDLVAKNFMGVATSLEGVVKNYLNCVEYEKVPSKILTYQASDDIVYSGYRSAVESTSKEDALMGFAVWEPPHGRYKMLRYPWKNYVKVSGALRHCTFMVMAMHGCILSEIQAPAEKRHVFRNELKKVGAEGAKVLRELGNKVKKMEKLGQEDILYEVHEAAEELQQKIDKKSFLLVNSESWEIGNRPRKEGDLQDLLNINEERQFLEYKSLSEAVLDLRAVKVPPSWGGQVTPDNNPAMPQNVADENMFMKQISWPAHISFKADAVTKEEESKTFESASSLSLATFTSHLIEFVARLQNLVDAFEELGEKAKFKDPLEQQAPVTSRGCWNRLFNCFNKD* 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00215 590 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 60 570 - -
Rops5g00215 590 Pfam Aluminium activated malate transporter 76 559 IPR020966 GO:0015743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00215 Rops-Chr5 3393313 3397512 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g00215 7 567 Miscellaneous Gene Families AT3G18440 62.586 0.0 704
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00215 K25841 - gmx:100810157 966.452
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops5g00215 5 3393313 3397512 Rops5g00215 5 3393313 3397512 ECH
Rops5g00215 5 3393313 3397512 Rops5g00215 5 3393313 3397512 PCT