Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00197 ATGGAAGCTGCATTTTGCAAACCACTTGCTCTTTCACCAAACCAAGCATTCAATACAACCAATCCTGGAGATAAAAATTTTCCTTTCAAATATAGCAAAGATCGGAGTATTGTAATGACAGTGGCAGCCACTGGATTAGGAAAAGGTGGTGGGTTGTTGGAGAGACCAACCATTGAGACAACATCACCTGGAAGGGAATCTGAATTTGACTTAAGGAAATCAAGAAAAACATCCCCACCTTACCGAGTATTGCTGCACAATGACAACTTTAATAAGAGGGAATATGTGGTGCAAGTGCTGATGAAGGTGATACCTGGAATGACCCTTGATAATGCTGTTAACATCATGCAGGAGGCACATTATAATGGTTTGGCAGTGGTCATAATCTGTGCTCAAGTGGATGCTGAAGATCACTGCATGCAGTTGAGAGGAAATGGCCTTTTAAGTTCAATTGAACCAGCTGATGGTGGATGTTGA 477 0.4172 MEAAFCKPLALSPNQAFNTTNPGDKNFPFKYSKDRSIVMTVAATGLGKGGGLLERPTIETTSPGRESEFDLRKSRKTSPPYRVLLHNDNFNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYNGLAVVIICAQVDAEDHCMQLRGNGLLSSIEPADGGC* 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00197 158 Gene3D - 75 153 IPR014719 -
Rops5g00197 158 SUPERFAMILY ClpS-like 75 152 IPR014719 -
Rops5g00197 158 PANTHER ATP-DEPENDENT CLP PROTEASE ADAPTER PROTEIN CLPS1, CHLOROPLASTIC 35 158 IPR022935 GO:0006508
Rops5g00197 158 Pfam ATP-dependent Clp protease adaptor protein ClpS 76 144 IPR003769 GO:0030163
Rops5g00197 158 FunFam ATP-dependent Clp protease adapter protein CLPS1, chloroplastic 75 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00197 Rops-Chr5 3036375 3039231 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00197 K06891 - gmx:100306117 287.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops5g00197 5 3036375 3039231 Rops5g00197 5 3036375 3039231 ECH