Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g02424 ATGGCGGCAACCCAATCACCACAGGTTCCGGATCGTACCACCGAAGAGATACCAGCTGAACCAGATAACATGAAGGATCAGGGTACAACAAATATAGGTCATTCAAGGGAGACCACAAGTCAACCAAGATCTTTTGGTTCAGGTGGAGACCATCCTCTGTACCCTCCTAATGTGTATACTCCCCAGGCTCAGGCTTTCTACTATAGGGGTTTTAACAATGGCAATGGTGAGTGGGATGAATATCCTTCATATCTCAATTCTGGGGGAACAGAAATTGGATCTCCTGGTGTCTACAATGAAAATCAATCTCTTTTTTTCCATTCTGGATATGGCTTCAACCCACAAATGCCTTATGCACCATATTCCCCAGTTACCACACCTTTGCCTTCTGTAGGTGGAGACACACAGTTATACTCCTCTCAGCAATTTCCATACACTGGGCCGCCTTATTACCATCAGCTGGTTCCTCCTAGCTTACCATATCTTAATTCACCGACTCCAGTTTCACAGCCAGAGCTCACCAACTTGGTAAGTGTTGACCAACAAGTTGATAGCATGTTTTTTGGACCAAGATCGGGCTATCCTTCAGTGGGATCTTTTGGTAGAGGAAGCTTTACGGTAACACCTACTTCTTTTAGCTTTCATGAATCCCAACAAGGAATTGATGAATCAAGATCTGGTGGAATCTGGTCAGATTGCTCAAAACCCTCAGAAAGGCAGAGATCTTTGATGCCTCTATCACCATCTGTTTCTCCACAGCCAATTGGCTCACTTGGGTCATTTGGGCTGAGTGTTGGAATGGCTTCTCATCAACAAAGTTCATTGTATGGTTTTGGGTCTGGTTCAAACTCCTATGGTAGAGGCTACCTCACTAACCAGGGTTCTAGCCTTGGAGACACTGCCATTCCTGGTACTCATGATCGGAGCTTCCTTTCTCTTGAAAATAGCAAACGGCAAGGCAGGGCAACTGCTTCTCTTTGCAAATGTAATGGTGCTCTTGATATCCTTAGTGAGCAGAACCGAGGACCAAGGGCCACAAAACTGAAAAATCAAATTTCAGCTGAAAATAGTTCTGTTGATAACAGTAAAAATGGTGCATCTATTGCCAAGTTCCAAGATGAATCACTCAACCGGCCAGATTTTGCCACAGATTACAAGGATGCCAAATTTTTTGTCATCAAATCTTATAGTGAAGATAATGTTCACAAGAGCATTAAATATGGTGTCTGGGCTAGTACACCAAATGGAAACAGAAAGTTAGATGCTGCGTATTGCCAAGCAAAGGAGAAGCAAGATGCCTGTCCAATATTTCTGTTTTTTTCGGTAAATGCTAGTGCTCAGTTCTGTGGGGTAGCTGAAATGGTTGGACCTGTCAATTTTGACAAGAATGTGGACTTCTGGCAACAAGATAAGTGGAGTGGGCAGTTTCCTGTGAAATGGTACATAATTAAAGATGTTCCAAACAGTCAGTTTCGTCACATTGTTCTTGAAAATAATGATAACAAGCCCGTTACCAACAGTCGAGATACTCAAGAGGTGACATTGCATCATGGGATTGAAATGTTGTCCATTTTTAAAAACTATGAAACTGATGTGTCCATCCTGGATGATTTTGATTTCTATGAAGAACGGCAGAAGGCTATGCAAGAACGAAAGGCAAGGCAGCAAAGCAGCATGATAGCTACTGGATTAGTTGGAGAAAGTGAGCATAGGCGATCTGGTGATTTCATCAAGCAGATGCCAAAGAGCTTTGCTCTGGTTGTCCGCTTAGACGAGAACAACAACGAAGATAGAGATGATTTAGCCTCTGATGGCTCCATTGGTAATGCAGTTAAACGTGATGAGGGCATTTCAGTGACTGCCTCTTCAACTCAAACCAATTAG 1884 0.4305 MAATQSPQVPDRTTEEIPAEPDNMKDQGTTNIGHSRETTSQPRSFGSGGDHPLYPPNVYTPQAQAFYYRGFNNGNGEWDEYPSYLNSGGTEIGSPGVYNENQSLFFHSGYGFNPQMPYAPYSPVTTPLPSVGGDTQLYSSQQFPYTGPPYYHQLVPPSLPYLNSPTPVSQPELTNLVSVDQQVDSMFFGPRSGYPSVGSFGRGSFTVTPTSFSFHESQQGIDESRSGGIWSDCSKPSERQRSLMPLSPSVSPQPIGSLGSFGLSVGMASHQQSSLYGFGSGSNSYGRGYLTNQGSSLGDTAIPGTHDRSFLSLENSKRQGRATASLCKCNGALDILSEQNRGPRATKLKNQISAENSSVDNSKNGASIAKFQDESLNRPDFATDYKDAKFFVIKSYSEDNVHKSIKYGVWASTPNGNRKLDAAYCQAKEKQDACPIFLFFSVNASAQFCGVAEMVGPVNFDKNVDFWQQDKWSGQFPVKWYIIKDVPNSQFRHIVLENNDNKPVTNSRDTQEVTLHHGIEMLSIFKNYETDVSILDDFDFYEERQKAMQERKARQQSSMIATGLVGESEHRRSGDFIKQMPKSFALVVRLDENNNEDRDDLASDGSIGNAVKRDEGISVTASSTQTN* 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g02424 627 MobiDBLite consensus disorder prediction 596 627 - -
Rops4g02424 627 Pfam YT521-B-like domain 388 526 IPR007275 GO:0003723
Rops4g02424 627 CDD YTH 389 525 IPR007275 GO:0003723
Rops4g02424 627 Gene3D ph1033 like domains 363 540 - -
Rops4g02424 627 MobiDBLite consensus disorder prediction 216 251 - -
Rops4g02424 627 MobiDBLite consensus disorder prediction 24 46 - -
Rops4g02424 627 ProSiteProfiles YTH domain profile. 388 525 IPR007275 GO:0003723
Rops4g02424 627 PANTHER YTH YT521-B HOMOLOGY DOMAIN-CONTAINING 77 583 IPR045168 -
Rops4g02424 627 MobiDBLite consensus disorder prediction 1 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g02424 Rops-Chr4 51394932 51415073 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g02424 K20102 - gmx:100816860 1080.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops4g02424 4 51394932 51415073 Rops4g02424 4 51394932 51415073 ECH