Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g02420 ATGTGGAGGCTGAAGATAGCGGAGGGTGGGAAGGACCCATACATATTCAGCACAAACAACTTCGTAGGGAGGCAGACATGGGAATTCGATCCAGAGGCGGGTACTCCCGAGGAGAGAGCCCAGGTTGAAGCCGCTCGTCAGGATTTCTATAACAACCGCTTCACGGTCAAGCCCTGTGGCGACCTCCTCTGGCGCTTTCAGATTCTGAGAGAAAATAATTTCAAACAAAAAATACCCGGTGTGAAGATAGAAGATGGAGAGGAGATAACATATGAAAAAGCCACAATCACGTTGAGAAGGGCCGCACATCACCTATCAGCATTGCAGACCAGTGATGGCCATTGGCCTGCTCAAATTGCAGGTCCTCTGTTTTTCCTTCCTCCCTTGGTCTTTTGTATGTACATCACAGGACATCTTGATTCGGTATTCCCGGACGAGTATCGCAAAGAGATTCTTCGTTACATATACTGTCACCAGAATGAAGATGGAGGGTGGGGACTACACATAGAGGGTCACAGCACCATGTTTTGTACTGCACTCAACTACATATGTATGCGAATTCTTGGAGAAGGGCCTGATGGAGGTCAAGATAATGCTTGTGCCAGAGCTAGAAAGTGGATTCATGATCATGGTAGTGTAACGCATATACCTTCATGGGGAAAAACTTGGTTATCGATACTTGGTGTATTTGATTGGTGCGGAAGCAACCCAATGCCCCCTGAGTTCTGGATCCTTCCTTCATTTCTTCCTATGCATCCAGCTAAAATGTGGTGTTATTGCCGATTAGTATACATGCCCATGTCTTACTTGTACGGGAAGAGGTTTGTGGGTCCAATCACACCACTCATCTTACAGTTGAGAGAAGAACTCTTTACTCAACCTTATGAAAAAGTTAATTGGAAGAAAGCACGTCATCAATGTGCAAAGGAAGATCTTTACTATCCCCATCCTTTGATACAAGATCTGATATGGGATAGTTTATACATTTTCACTGAGCCATTTCTAACTCGTTGGCCTTTCAACAAGTTAATCAGAGAAAAAGCCCTTCAAGTAACAATGAAACATATCCACTACGAAGATGAGAACAGTCGATACATAACCATTGGTTGTGTGGAAAAGGTTTTATGTATGCTTGCTTGTTGGGCGGAAGATCCAAACGGAGATGCTTTTAAGAAGCATCTTGCTAGGGTCCCAGATTACTTATGGATTTCAGAAGATGGAATGACTATGCAGAGTTTTGGTAGCCAAGAATGGGATGCTGGTTTTGCCGTTCAAGCTTTGCTTGCCACTAACCTAATAGAGGAAATTGGTCCCACACTTGCGAAGGGACATGATTTCATCAAGAAATCTCAGGTTAGAGACAACCCTTCCGGAGATTTTAAGAGTATGTATCGTCATATTTCTAAAGGGTCATGGACCTTCTCTGATCAAGATCATGGATGGCAAGTTTCTGATTGCACTGCAGAAGGTTTGAAGTGTTGTCTACTTTTATCGATGTTGCCTCCAGAGATTGTGGGGGAGAAGATGGAACCTGAATGGTTATATGATTCTGTCAATGTCCTATTGTCGCTTCAGAGTAAAAAGGGTGGTTTAGCAGCATGGGAGCCAGCAGGAGCTCATGAATGGTTGGAACTACTCAATCCCACGGAATTTTTTGCGGACATCGTCGTTGAGCATGAATATGTTGAATGCACCGGATCGGCAATTCAAGCTCTAGTTTTGTTCAAGAAGTTATATCCAGGGCATAGAAAGAAAGAGATAGAGAATTTCATTGCCAACGCAGTTCGATTCCTTGAAGATACACAAACAGCTGATGGTTCGTGGTATGGAAATTGGGGAGTTTGCTTCACTTATGGTACTTGGTTTGCACTTGGAGGTCTAGCAGCCGCTGGTAAGACTTACACCAATTGTGTTGCCATTCGCAAAGCTGTTAAATTTCTACTCACAACACACAGAGAGGATGGTGGGTGGGGAGAGAGCTATCTTTCAAGCCCAAAAAAGATATACGTACCTCTTGAAGGAAGCCGTTCAAATGTTGTACATACAGCATGGGCTCTTATGGGTTTAATTCATGCTGGCCAGGCAGAGAGAGATCCTACTCCACTTCATCGTGCTGCAAAATTACTCGTTAATTCTCAGCTTGAAGATGGCGATTGGCCCCAACAGGAAATCACGGGAGTATTCATGAAAAATTGCATGCTGCATTACCCAATGTATAGAGATATTTATCCAATGTGGGCTCTAGCTGAATATCGTAGACGCGTTCCTTTGCCTTCCACTGTAGTTTAA 2289 0.4382 MWRLKIAEGGKDPYIFSTNNFVGRQTWEFDPEAGTPEERAQVEAARQDFYNNRFTVKPCGDLLWRFQILRENNFKQKIPGVKIEDGEEITYEKATITLRRAAHHLSALQTSDGHWPAQIAGPLFFLPPLVFCMYITGHLDSVFPDEYRKEILRYIYCHQNEDGGWGLHIEGHSTMFCTALNYICMRILGEGPDGGQDNACARARKWIHDHGSVTHIPSWGKTWLSILGVFDWCGSNPMPPEFWILPSFLPMHPAKMWCYCRLVYMPMSYLYGKRFVGPITPLILQLREELFTQPYEKVNWKKARHQCAKEDLYYPHPLIQDLIWDSLYIFTEPFLTRWPFNKLIREKALQVTMKHIHYEDENSRYITIGCVEKVLCMLACWAEDPNGDAFKKHLARVPDYLWISEDGMTMQSFGSQEWDAGFAVQALLATNLIEEIGPTLAKGHDFIKKSQVRDNPSGDFKSMYRHISKGSWTFSDQDHGWQVSDCTAEGLKCCLLLSMLPPEIVGEKMEPEWLYDSVNVLLSLQSKKGGLAAWEPAGAHEWLELLNPTEFFADIVVEHEYVECTGSAIQALVLFKKLYPGHRKKEIENFIANAVRFLEDTQTADGSWYGNWGVCFTYGTWFALGGLAAAGKTYTNCVAIRKAVKFLLTTHREDGGWGESYLSSPKKIYVPLEGSRSNVVHTAWALMGLIHAGQAERDPTPLHRAAKLLVNSQLEDGDWPQQEITGVFMKNCMLHYPMYRDIYPMWALAEYRRRVPLPSTVV* 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g02420 762 CDD SQCY_1 98 751 IPR018333 GO:0005811|GO:0016104|GO:0016866
Rops4g02420 762 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 121 410 IPR008930 -
Rops4g02420 762 Gene3D - 508 723 - -
Rops4g02420 762 FunFam Terpene cyclase/mutase family member 389 758 - -
Rops4g02420 762 ProSitePatterns Terpene synthases signature. 605 619 IPR002365 GO:0016866
Rops4g02420 762 Pfam Squalene-hopene cyclase C-terminal domain 418 753 IPR032696 -
Rops4g02420 762 PANTHER TERPENE CYCLASE/MUTASE FAMILY MEMBER 1 756 IPR018333 GO:0005811|GO:0016104|GO:0016866
Rops4g02420 762 Pfam Squalene-hopene cyclase N-terminal domain 99 405 IPR032697 -
Rops4g02420 762 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 351 756 IPR008930 -
Rops4g02420 762 Gene3D - 119 414 - -
Rops4g02420 762 NCBIfam squalene/oxidosqualene cyclases 97 753 IPR018333 GO:0005811|GO:0016104|GO:0016866
Rops4g02420 762 SFLD Prenyltransferase Like 2 87 754 IPR018333 GO:0005811|GO:0016104|GO:0016866
Rops4g02420 762 FunFam Uncharacterized protein 119 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g02420 Rops-Chr4 51302773 51312901 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g02420 K15813 K20658 ag:BAA89815 1551.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops4g02420 4 51302773 51312901 Rops4g02420 4 51302773 51312901 ECH