Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g02402 ATGGGGCAGTCGAAGAGTGAGACGGTACACTCGCCGCTGGTGACCTACGCTTCCATGATATCTCTGCTCACACTCTGTCCTCCATTTGTCATACTCTTATGGTACACGATGACAGCTGCGGATGGATCCATTTTGGAGACTTGGGATCACTTGAAGAACAAGGGATTCCTAAATCTCTGTCCTAAACCCACTCCTACGGCTTGCAAACTCATCGCCATCTATGCTGCTTTTGAAGCCGCCCTTCAGCTTCTTCTTCCCGGTCAAACCGTCTACGGCCCTATTTCTCCATCTGGCAATCGCCCTGTCTACAAGGCAAATGGTGTCGCCGCTTATTTAGTGACCTTGATTACTTATATTGCCCTTTGGTGGTTTGGGATATTCAACCCCACAGTCGTTTATGATCATTTGGGAGAGATATATTCCACACTCATCATTGGCAGCTTTGTCTTTTGTATTTTCTTATACATAAAAGGTCATTTGGCACCATCTTCTACTGATTCTGGCTCATCAGGGAACATAATCATTGATTTTTACTGGGGTATGGAGCTCTATCCACGCATTGGAAAATATTTTGACATCAAAGTTTTCACAAACTGCAGATTTGGAATGATGTCATGGGCTGTTCTTGCACTTACCTATTGCATAAAGCAGTATGAAGAAAATGGCAAAGTAGCCGACTCAATGCTTGTAAATACTACATTAATGCTGGTGTATGTTACCAAGTTTTTCTGGTGGGAAGCTGGATATTGGAACACAATGGATATTGCACATGATCGAGCTGGATTTTATATTTGCTGGGGCTGTTTGGTGTGGGTTCCATCTGTGTACACATCTCCTGGAATGTACCTTGTCAACCATCCTGTAAATCTTGGCACCCAGCTAGCACTCTTCATTTTAGTGGCTGGCATTCTTTGCATATACATCAACTATGATTGTGACAGGCAAAGGCAAGAATTTCGTAGGACAAATGGAAAATGCCTGATCTGGGGAAGAGCTCCATCAAAGATAGAGGCCTCCTATACTACTACTTCTGGGGAAACAAAAAGAAGCCTTCTTTTAACCTCTGGATGGTGGGGATTATCTCGTCATTTTCATTATGTCCCCGAAATACTAGCTGCTTTCTTCTGGACCGTCCCAGCTCTTTTCAATCATTTTCTGCCTTACTTCTATGTGATATTTCTTACCATCCTTCTTTTTGATCGAGCAAAAAGGGATGATGATCGATGCAGATCCAAGTATGGCAAGTACTGGAAACTGTATTGTGACAAGGTGCCTTACAGAATCGTTCCAGGAATATACTGA 1302 0.4309 MGQSKSETVHSPLVTYASMISLLTLCPPFVILLWYTMTAADGSILETWDHLKNKGFLNLCPKPTPTACKLIAIYAAFEAALQLLLPGQTVYGPISPSGNRPVYKANGVAAYLVTLITYIALWWFGIFNPTVVYDHLGEIYSTLIIGSFVFCIFLYIKGHLAPSSTDSGSSGNIIIDFYWGMELYPRIGKYFDIKVFTNCRFGMMSWAVLALTYCIKQYEENGKVADSMLVNTTLMLVYVTKFFWWEAGYWNTMDIAHDRAGFYICWGCLVWVPSVYTSPGMYLVNHPVNLGTQLALFILVAGILCIYINYDCDRQRQEFRRTNGKCLIWGRAPSKIEASYTTTSGETKRSLLLTSGWWGLSRHFHYVPEILAAFFWTVPALFNHFLPYFYVIFLTILLFDRAKRDDDRCRSKYGKYWKLYCDKVPYRIVPGIY* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g02402 433 Pfam Ergosterol biosynthesis ERG4/ERG24 family 46 433 IPR001171 GO:0016020|GO:0016126|GO:0016628
Rops4g02402 433 Gene3D - 222 432 - -
Rops4g02402 433 ProSitePatterns Sterol reductase family signature 1. 171 186 IPR018083 GO:0016628
Rops4g02402 433 ProSitePatterns Sterol reductase family signature 2. 397 420 IPR018083 GO:0016628
Rops4g02402 433 PANTHER DELTA(14)-STEROL REDUCTASE 4 433 - -
Rops4g02402 433 FunFam Putative 7-dehydrocholesterol reductase 223 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g02402 Rops-Chr4 51085630 51090324 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g02402 6 433 Miscellaneous Gene Families AT1G50430 82.407 0.0 742
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g02402 K00213 - gmx:102659420 816.609