Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g02342 ATGGCTGCTGCAGCTGCTGGGGTTGTTGGTGGTAATGGATCATCTGCTTCTTGGATGCAATTCAGAAGCAGGGAAAGGAAGCAAACTAAGGCTAACAGGGCAAGGATTTGTTGCTCTTATTCTTCTTCTTCTGTGATGGATCCTTATAAGACCTTGAGAATACAACCAGGTGCCTCTGAATCTGAGGTTAGGAAGGCTTTCAGACAGCTTGCTTTACAGTACCATCCAGACGTTTGCAGAGGAAGCAATTGTGGGGTGCAGTTTCACGTAATCAACGAGGCTTATGATATTGTGATGGCCAATTTGAGAGGAGAATCAAATGAGACAGAAACGTATGAGGCGTATTATGATGCAGGCATTGATGAACCACTGAGGGGAATGAATGATCCAGATTGGGACATGTGGGAAGAGTGGATGGGTTGGGAAGGAGCAGGAATCCGTGATTACTCATCTCACATCAATCCTTACATTTGA 474 0.4515 MAAAAAGVVGGNGSSASWMQFRSRERKQTKANRARICCSYSSSSVMDPYKTLRIQPGASESEVRKAFRQLALQYHPDVCRGSNCGVQFHVINEAYDIVMANLRGESNETETYEAYYDAGIDEPLRGMNDPDWDMWEEWMGWEGAGIRDYSSHINPYI* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g02342 157 FunFam chaperone protein dnaJ 8, chloroplastic 19 108 - -
Rops4g02342 157 Gene3D DnaJ domain 17 106 IPR036869 -
Rops4g02342 157 SUPERFAMILY Chaperone J-domain 43 145 IPR036869 -
Rops4g02342 157 CDD DnaJ 47 97 IPR001623 -
Rops4g02342 157 PANTHER CO-CHAPERONE PROTEIN DJLA 33 155 - -
Rops4g02342 157 Pfam DnaJ domain 47 99 IPR001623 -
Rops4g02342 157 PRINTS DnaJ domain signature 83 103 IPR001623 -
Rops4g02342 157 PRINTS DnaJ domain signature 49 67 IPR001623 -
Rops4g02342 157 PRINTS DnaJ domain signature 67 82 IPR001623 -
Rops4g02342 157 ProSiteProfiles dnaJ domain profile. 47 116 IPR001623 -
Rops4g02342 157 SMART dnaj_3 46 103 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g02342 Rops-Chr4 50527375 50528883 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g02342 - - gmx:100780336 264.618