Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g02319 ATGAACTCTCCTAATGAGACTCAGTGTTTAATTGAGAGAGATACAGCAAAGAGGCTTAAACATATGGGGAGGAAGCTACTCAGATATCTGCCTTCGGTTGATAAGCTTCTTGAACTACTTGATAATTTGGAGTGGGTATTATCAACTGTGGATCAAGCACCAACCAAGCCAATTCAAGAGTCACTTGTGCCTTCAATGAAGGCATTGATATCTGATGAACTTTTGAGACACACAGACGAAGATGTTAAGATTTCAGTTACATCTTGCATCACTGAGATTACAAGAATTACAGCACCAGATGCCCCTTATGATGATGAACAGATGAAGGAAATTTTCAAGCTCACAGTGGCAGCTTTTGAGAAATTGTCTCATGTATCTGGCCGTGGCTATGAAAAAGCACTTGCCATACTTGATAATGTTTCAAAGATCAGATTATACTTGGTCATGCTGGACCTTGAATGTGATGACCTGGTTATTGAGATGTTTCAGCATTTCTTGAGATTTGTAAGGTCAACCCATCCCAGTAATGCATTTCATTCAATGGAATCAATAATGACTCTGGTCTTAGATGAAAGCCAACAAATTTCCCCAGATCTTCTTAGAACTCTATTAGATAGCGTGAGAAAGGAGAATCAGACTATTTCACCTATTTCTTGGACCTTGGGGGAGAAAGTAATTGCCAACTGTGCTGTTAAACTCAAGCCGTATCTCATGAAAACGGTGGAGTCCACAGGCAAAGCTCATGATGAATATGCACAAATAGTAACTTCCATTTGCCAGAATCAATCTGAATTTCCTCAAGGCAATCATTCAATTGGTTCTGAGAAGACAATGGTTCAAGCAGTTGAGAACAAACTTGATGCACCTAAAGATGCAGATGAACAACCCTGTGATGTGACCAAAGGGATTGAACTGGATATTACATGTGTGAGAGATGTGCAAATTATGGATGATACAGAGTCAAACATAAGAAGTGCCAGTGCTGCTACTATGGACGGTGAAGTTATAAAAAAGTCTGATTCAAAAAGGAAACCACATTCTGATCTTCCTAAGAGCTCCAAAAGAAGCAATGCTAAAACCAATTCTGAAACTGGCAATTTAGAGTCTGTTTGGGAACCAAAATCAGAAACTCAGCTGAATACTATGCCAAGCAAGAGGGGCCGAAAGCCTAATTCTTTAATGAATGCAAAGGAAGGCTATGATAACTCTTGGATTTGTATGGGAACAAAAACTGGAAAATCAGCTCCATCCAGAAAGGCTCGTGATAGTAGCTCTGCTTTTCCACCACCCGAAAACCCAACTTCCAGAAAGGATAAGTTGCAGCCAAAGCCTAAAACTGTAAGTGAAGCTCTAGTTTTTGAGCCGAAAAATGAAAACATTACAAAACCTGCTCAATCCAGAAAGACTCGCGATATTGGCAGTGATTTTCCTCCTTCTAAAAACCCTGCTTCCAGCAAGGATAATGTATCGTCAAAGCCTGGAGATATGAGTGAGGGTCTTGAAACTTCAGTTGCCAAACCTAAAACTGATGAGGATATCGATGCTTCTCCTCCTTTTACAAATCATAACATTCCTGATGGAGGCCACCCCAAAAGAGGTCGGCCAAGGAAAATAAGTAGCACAAGGAATCAAGATGTTCATCCTAATTCCTTGTCAACGTTAAAGGAAGACAATTTGAATCCTCTGCTTGAGAATACTTCTTTGGAATCCCCTGGTGTTAGGTTGGAAAAGGAATCTGATGTAAGGAAGGATTCTGAAGCAAAACCTCAGGCATCCATTAGGAAAATCAAATTTTCTTTCAAGACTGATGGGAAAACTGACGTGGCTCCTAAATTGGTGGTTGCCAAGATGGAATCAAAGGTCTTTTGTGAAGGTGAGAGGAAACACAAGTCAGCTACGAGTATGGAGGTAGAAAATAGAGAAGAGGGCAGGTCTTCAGCTCAAACAGAAGTTAAGAAAAGGAGGCATAATGCTACTCCTTATAAAGGTCTCAACAAATCATCTACTATGAAGGGATATGAATCCCTTGGTGACTCATTGGTTGGTAGTCGGATCAAGGTCTGGTGGCCATTGGACAAGATGTTTTATGAAGGTGTTATCGATTCTTATGATCCTGTCAAAGGAAAGCACAAGATTTTGTATGCTGATGGTGATGAAGAAGTGTTAAATCTCAAAAAACAGCGCTGGGAACTAGTTGATGTTGATGTTTCACCAGATGAGGAAGAAGGACTTGGACTTCAGAAGCTTGCAGAGGCATCAGATATAGCAGAAAAATGCATGGAAAAATCCGAGTTGGAGTCAGCCAAGGGTGCAAATATCAAATCTGGATCCAGGGGTAAAACCAAAAGAATGAAGACAAGTTCAGACATCAAAAAGAACAAATTTGAGACTGATGGACCTTGA 2403 0.4037 MNSPNETQCLIERDTAKRLKHMGRKLLRYLPSVDKLLELLDNLEWVLSTVDQAPTKPIQESLVPSMKALISDELLRHTDEDVKISVTSCITEITRITAPDAPYDDEQMKEIFKLTVAAFEKLSHVSGRGYEKALAILDNVSKIRLYLVMLDLECDDLVIEMFQHFLRFVRSTHPSNAFHSMESIMTLVLDESQQISPDLLRTLLDSVRKENQTISPISWTLGEKVIANCAVKLKPYLMKTVESTGKAHDEYAQIVTSICQNQSEFPQGNHSIGSEKTMVQAVENKLDAPKDADEQPCDVTKGIELDITCVRDVQIMDDTESNIRSASAATMDGEVIKKSDSKRKPHSDLPKSSKRSNAKTNSETGNLESVWEPKSETQLNTMPSKRGRKPNSLMNAKEGYDNSWICMGTKTGKSAPSRKARDSSSAFPPPENPTSRKDKLQPKPKTVSEALVFEPKNENITKPAQSRKTRDIGSDFPPSKNPASSKDNVSSKPGDMSEGLETSVAKPKTDEDIDASPPFTNHNIPDGGHPKRGRPRKISSTRNQDVHPNSLSTLKEDNLNPLLENTSLESPGVRLEKESDVRKDSEAKPQASIRKIKFSFKTDGKTDVAPKLVVAKMESKVFCEGERKHKSATSMEVENREEGRSSAQTEVKKRRHNATPYKGLNKSSTMKGYESLGDSLVGSRIKVWWPLDKMFYEGVIDSYDPVKGKHKILYADGDEEVLNLKKQRWELVDVDVSPDEEEGLGLQKLAEASDIAEKCMEKSELESAKGANIKSGSRGKTKRMKTSSDIKKNKFETDGP* 801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g02319 800 MobiDBLite consensus disorder prediction 542 567 - -
Rops4g02319 800 CDD Tudor_Agenet_AtEML-like 681 731 - -
Rops4g02319 800 SUPERFAMILY Tudor/PWWP/MBT 679 721 - -
Rops4g02319 800 MobiDBLite consensus disorder prediction 571 590 - -
Rops4g02319 800 MobiDBLite consensus disorder prediction 527 541 - -
Rops4g02319 800 MobiDBLite consensus disorder prediction 631 657 - -
Rops4g02319 800 MobiDBLite consensus disorder prediction 335 353 - -
Rops4g02319 800 Gene3D - 673 727 - -
Rops4g02319 800 PANTHER ANDROGEN INDUCED INHIBITOR OF PROLIFERATION AS3 / PDS5-RELATED 342 788 IPR039776 GO:0007064
Rops4g02319 800 MobiDBLite consensus disorder prediction 782 800 - -
Rops4g02319 800 MobiDBLite consensus disorder prediction 322 590 - -
Rops4g02319 800 MobiDBLite consensus disorder prediction 354 388 - -
Rops4g02319 800 MobiDBLite consensus disorder prediction 761 800 - -
Rops4g02319 800 FunFam Binding protein 676 728 - -
Rops4g02319 800 Pfam Sister chromatid cohesion protein PDS5 protein 34 238 - -
Rops4g02319 800 MobiDBLite consensus disorder prediction 631 666 - -
Rops4g02319 800 MobiDBLite consensus disorder prediction 478 497 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g02319 Rops-Chr4 50257127 50267601 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g02319 - - aprc:113857095 959.518