Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g02316 ATGTCTTCAAAGTTGGTAGTATGGGACCTCCACAAAATAACAAGAAGAAGAAGAATAACAAGGAAAAAGCAAAACCAATTAAACAGACAAAGAAGCAAGAAAAAACCAATCCCACCACTAATTTTTACAAAAATATCTTCCACATCCCAATCAGCACATTTCTTCTCTTCCCCCATTTCATACCAAAAAGAAAAAAAAAAGAAAAAAGAAAAAGAAAACCCTAGAACGGGAGAGATTTCATATCCCCACAAATCTCTTCCTTCTCTCTCCTCCATTATCTCTGTTCCCCTCTCAACAAGTTCCAATCTTTCCCTTGATTCTCATATCCAAGTTCCCTGGGCGTTCTCTTTTTTAGACCTGAGATCTGGTGGATTTTATGGTAAATTGTGGGTTCGAGGAATGCCGCTAATTTTGCCTAAAAGCGAATCGATCCAGATTCGAGAGGTGTGGAACGATAATCTTGAAGAAGAATTCGCGTTGATAAGGGAAATCGTCGATGATTACCCTTACGTCGCGATGGACACGGAATTTCCTGGAATCGTTCTTCGACCTGTGGGGAATTTCAAGAACAGCTACGATTATCATTACCAAACCCTAAAAGACAACGTTGACATGTTGAAGCTGATTCAATTGGGTCTCACGTTTTCCGATGAGCAAGGGAACCTTCCAACGTGTGGCACAGATAAATTTTGCATCTGGCAATTCAATTTCCGTGAATTCAATGTGAATGAGGATGTTTTCGCGAATGATTCAATTGAACTATTGAGACAGAGTGGTATTGATTTCAAGAAGAACAATGAGAAAGGCATTGATGCTCACCGTTTTGGTGAGCTCTTGATGTCTTCTGGGATTGTGTTGAATGATAGTGTTCACTGGGTTACTTTCCATAGTGGTTATGATTTTGGGTACTTGCTTAAGCTATTGACATGTCAGAATTTGCCTGATACACAAGTGGGGTTCTTTAATTTGATCAACATGTACTTCCCAACTGTTTATGATATCAAGCATCTCATGAAGTTTTGCAACAGCCTTCATGGGGGGTTGAACAAGCTTGCAGAGTTGTTGGAGGTGGAGAGGGTTGGGATTTGTCATCAGGCTGGTTCTGATAGTTTGCTCACATCTTGTACATTCAGGAAATTGAAAGAGAATTTCTTTAGTGGCTCTTTGGAGAAATATGCTGGTGTCTTGTATGGGTTAGGTGTTGAGAATGGACAGAGTTCTCATTGA 1227 0.4002 MSSKLVVWDLHKITRRRRITRKKQNQLNRQRSKKKPIPPLIFTKISSTSQSAHFFSSPISYQKEKKKKKEKENPRTGEISYPHKSLPSLSSIISVPLSTSSNLSLDSHIQVPWAFSFLDLRSGGFYGKLWVRGMPLILPKSESIQIREVWNDNLEEEFALIREIVDDYPYVAMDTEFPGIVLRPVGNFKNSYDYHYQTLKDNVDMLKLIQLGLTFSDEQGNLPTCGTDKFCIWQFNFREFNVNEDVFANDSIELLRQSGIDFKKNNEKGIDAHRFGELLMSSGIVLNDSVHWVTFHSGYDFGYLLKLLTCQNLPDTQVGFFNLINMYFPTVYDIKHLMKFCNSLHGGLNKLAELLEVERVGICHQAGSDSLLTSCTFRKLKENFFSGSLEKYAGVLYGLGVENGQSSH* 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g02316 408 Gene3D - 133 403 IPR036397 GO:0003676
Rops4g02316 408 SUPERFAMILY Ribonuclease H-like 146 399 IPR012337 -
Rops4g02316 408 MobiDBLite consensus disorder prediction 61 80 - -
Rops4g02316 408 Pfam CAF1 family ribonuclease 149 270 IPR006941 -
Rops4g02316 408 PANTHER CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 143 400 IPR039637 GO:0004535|GO:0030014
Rops4g02316 408 FunFam Putative CCR4-associated factor 1 7 137 403 - -
Rops4g02316 408 MobiDBLite consensus disorder prediction 61 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g02316 Rops-Chr4 50241469 50244131 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g02316 K12581 - zju:107409059 541.962