Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g02313 ATGGAGGTGCCGAGTTCATGGGATGCCCTTCGCAAACAGGCAAGAAAACTTGAAGCTCAGTTAGATGAGCGGATGAATTCTTATCGTAAAGTGGTTTCTGCAAAAGCTGATACTGCAGAGAGTGATTTAGAGTCTTGGATTGAACGATTACTAAAACAACTCCAACAAGTAAACTCACAGATGCAAGCTTGGGTATCATCCGGTGGTTCAGATGTGGTTTCTCATACTTTGACTAGACACCAAGAAATTCTTCAAGATCTTACCCAGGAGTTTTATCGTCTTCGCTCAAGTCTTCGAGCTAAGCAAGAACATGCTTCCCTATTAGAGGATTTTAAAGAATTTGATCGGACAAGATTGGACTTGGAAGAGGGTGTGGAATCTGAACAGCATGCACTCCTAAAAGAGCGTGCATCTATCAGCCGAAGTACAGGACATATGGACTCTGTTATTTCACAAGCCCAAGCAACACTTGGTGCGCTTGTTTTCCAGCGATCAACATTTGGTGGCATCAATTCAAAGCTCAGCAATGTGAGTGGTCGCCTCCCAACGGTAAATAACATACTATCGGCAATAAAGCGAAAAAAGTCAATGGATACAATTATACTTTCTCTTGTTGCATCCGTATGCACATTTCTCATTTTCATCTACTGGCTAACCAAATGA 663 0.4208 MEVPSSWDALRKQARKLEAQLDERMNSYRKVVSAKADTAESDLESWIERLLKQLQQVNSQMQAWVSSGGSDVVSHTLTRHQEILQDLTQEFYRLRSSLRAKQEHASLLEDFKEFDRTRLDLEEGVESEQHALLKERASISRSTGHMDSVISQAQATLGALVFQRSTFGGINSKLSNVSGRLPTVNNILSAIKRKKSMDTIILSLVASVCTFLIFIYWLTK* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g02313 220 PANTHER GOS-28 SNARE- RELATED 4 218 IPR023601 GO:0000139|GO:0005801|GO:0006888|GO:0016020
Rops4g02313 220 Pfam Snare region anchored in the vesicle membrane C-terminus 131 195 - -
Rops4g02313 220 Coils Coil 47 67 - -
Rops4g02313 220 PIRSF Golgi_SNARE 1 219 IPR023601 GO:0000139|GO:0005801|GO:0006888|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g02313 Rops-Chr4 50217808 50221878 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g02313 K08495 - gmx:100797885 385.571