Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g02309 ATGCTGTGCCGGAAAAGTTCTAGGAAAGGCGTCGCTTCAGGATCGGTGCCGGTGTACCTTAACGTGTACGATCTGACACCAATCAACGGTTACGCTTACTGGTTCGGCCTTGGAGTGTACCATTCCGGCGTGCAAGTTCATGGTGTAGAGTATGCTTTTGGGGCTCATGAGTACCCATCGACGGGGATATTTGAAGGTGAACCGAAGAGGTGTGAAGGGTTCAGATTCAGGAAGACGATACTGATTGGAAAGACGGGTATGGGGCCAGGTGAGGTGAGGGGTGTGATGGAAGAATTTGCTGCTGAGTATAGAGGGAATGCTTACAATCTTATCACCAAGAATTGTAACCATTTTTGTAATGATGCTTGTGTTAGGCTCACTGGAAATTCTATACCCAGTTGGGTCAATCGTCTTGCCAGGATTGGATTTTTGTGCAATTGTGTTCTTCCTGTGACTTTGAACTCAACTAAAGTTAGGCATCATAGAATAGAAGACAAGCAATGTGAAGGAGAGAAGCAAGCATTAACCAGTGAACCCAACAAGCTAACTGCTTCAAATTCAACATCTTCCTCATCATCTCCTGCTTCTAGCTCTGGATTGCGCAGGGGAAGGAGTAGAAAAAGACGTGCCCTTCCTCCATCTTCTCCTTTGATTACTGAGTCTTCTTCATCTTCATGTCCAAAATCTTAA 690 0.4536 MLCRKSSRKGVASGSVPVYLNVYDLTPINGYAYWFGLGVYHSGVQVHGVEYAFGAHEYPSTGIFEGEPKRCEGFRFRKTILIGKTGMGPGEVRGVMEEFAAEYRGNAYNLITKNCNHFCNDACVRLTGNSIPSWVNRLARIGFLCNCVLPVTLNSTKVRHHRIEDKQCEGEKQALTSEPNKLTASNSTSSSSSPASSSGLRRGRSRKRRALPPSSPLITESSSSSCPKS* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g02309 229 PANTHER DESUMOYLATING ISOPEPTIDASE 15 197 IPR008580 GO:0008233
Rops4g02309 229 Pfam PPPDE putative peptidase domain 17 150 IPR008580 GO:0008233
Rops4g02309 229 MobiDBLite consensus disorder prediction 169 229 - -
Rops4g02309 229 MobiDBLite consensus disorder prediction 173 200 - -
Rops4g02309 229 SMART DUF862_2a 16 154 IPR008580 GO:0008233
Rops4g02309 229 ProSiteProfiles PPPDE domain profile. 16 153 IPR008580 GO:0008233
Rops4g02309 229 Gene3D PPPDE domains 12 169 IPR042266 -
Rops4g02309 229 MobiDBLite consensus disorder prediction 215 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g02309 Rops-Chr4 50191600 50193622 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g02309 K22763 - gmx:100796813 358.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops4g02309 4 50191600 50193622 Rops4g02309 4 50191600 50193622 ECH