Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g02308 ATGCGACGCTCCTCTGCATCCAAAAAGACGGGTCAATCCAATTCCCTCAATCCCTCCCCAGCCGATCTCTTCCGCTCCGCTTCTAGTAAAGCAAGCTCAAAGGAATCAGAACGGATTGATAGTCTATTTTATTCTTATGCCAATGGATCTACTGGGTTGATTGACCCAGAAGGAATTGAAACACTTTGTGCTGATATGGAGGTGGATCATACTGATGTGAGGATTTTGATGCTTGCATGGAAAATGAAAGCTGAGGAGCAAGGATATTTTACCTTGGATGAGTGGAGGAGAGGCTTAAAAGCTCTAAGGGCTGATACAGTAAGTAAATTGAAAAAGGCACTTCCAGACCTAGAAAAAGAGGTCAGGAGGCCATCAAATTTTGCAGATTTCTATTCTTATGCTTTCCAATATTGTCTAACAGAGGAGAAACAGAAAAGCATTGATATAGAGAGCATTTGTGAATTACTTAATCTTGTTTTGGGTTCAACATTTCCAGCCCAAGTCAACTCATTTGTGGAATATTTGAAGACTCAAAATGATTACAAGGTCATAAACATGGATCAATGGATGGGATTTTTCCGGTTTTGCAACGAGATAAGTTTTCCAATGCTTGATAACTATGATCCTGAACTTGCCTGGCCCTTGATCCTTGATAATTTCGTTGAATGGTTGCGAGAGAAGCAAAATTAA 690 0.4014 MRRSSASKKTGQSNSLNPSPADLFRSASSKASSKESERIDSLFYSYANGSTGLIDPEGIETLCADMEVDHTDVRILMLAWKMKAEEQGYFTLDEWRRGLKALRADTVSKLKKALPDLEKEVRRPSNFADFYSYAFQYCLTEEKQKSIDIESICELLNLVLGSTFPAQVNSFVEYLKTQNDYKVINMDQWMGFFRFCNEISFPMLDNYDPELAWPLILDNFVEWLREKQN* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g02308 229 SUPERFAMILY EF-hand 26 196 IPR011992 -
Rops4g02308 229 Gene3D Cullin, PONY binding domain 124 229 IPR042460 -
Rops4g02308 229 Gene3D - 32 122 - -
Rops4g02308 229 MobiDBLite consensus disorder prediction 1 32 - -
Rops4g02308 229 FunFam Defective in cullin neddylation protein 124 229 - -
Rops4g02308 229 ProSiteProfiles DCUN1 domain profile. 34 225 IPR005176 -
Rops4g02308 229 FunFam Defective in cullin neddylation protein 32 122 - -
Rops4g02308 229 Pfam Cullin binding 109 223 IPR005176 -
Rops4g02308 229 PANTHER RP42 RELATED 8 229 IPR014764 -
Rops4g02308 229 MobiDBLite consensus disorder prediction 7 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g02308 Rops-Chr4 50184492 50189136 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g02308 K17824 - gmx:100499856 431.024
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops4g02308 4 50184492 50189136 Rops4g02308 4 50184492 50189136 ECH