Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g02299 ATGAGAACTTCGACCCATTTCACTAGCGTGAACGTGCATTTTCTTAGAGACTATGACCTAATCCTTATAGCCCATATTTTCCCTTTCCTGGAAGTACTCGATCTCAGTCTCCCTAAAAACCCTATTGAGCTCTCCAATTGCAACAAATCCAATGGCCCCGCCTCTGATCTGGGGGTAAAGGCTCTGTCTTTGGCACTTCCCAATCTCCGCAAGATTAATCTCTCTTGTAATATCTTCATCACTGACGAATCCATTTTTAGTTTATGCAAGAACTCTGTGTTTCTCGAAGAGGTTTTGATCTTTGATTGCCATTTACTAACACAACATGGCATTGCTTCTACCATCCGCCAGAGACCCAATTTGAAGTCTCTCTCTGTTGATGATTTTGGGGACATTGGTGTTTCTTCACATTTCATTGACTCGTTGGTGAGTTTGAAGAGCTTGACTTGTCTTCAATTGTATCTTTCGAGTATCTCAGACAAGTTGCTATTCTCTATAGCAATGGAAGGTCTTCCTTTGAGGAAGCTTGTGCTATCCTTGTCCTTTTGCAGCAGCAACTATAGTTATACTGGAATCCGTTGCTTGTTGACAAAGTGTCGATTTGTCCAACATTTGGATCTTCAAAATGCCAAGTTTCTGAATGATCAGCATGTCGCCGAATTGTCTGTGTTTCTTGGTGATTTGAAATTTATAAACCTTAGAAGTTGTAGGATGCTTACCCATTCAGCATTCTTTGCACTCGTCAGGAACTGTCCTTTGCTCAGTGAGATCAGAATGGAGAACACACATATTGGGGAAAAAGGAGTAGAGGATTCTAATTCTTTGATGGATTTTGTAAACACTCAAGTGAAGTCTCTCCATTTGGGTCATAATGCACGTTTGAGTGATGAAAACATCAAAATATTTGTTTCCATTTGCCCCAATTTGGAGCTGCTTGACTTGAGTTATTGCCGGGGCACATCTGAAGGCATTGTTGAAGTTTCAAGGAGATGCCCTAATACTAGGCATTTGAATCTAGCCGGTTATCTAGGAGTGAAGCTACATGGGGTGAACTTTGGAATGCCCAAGCTGGAGGTGTTGAACTTGTCATCGTCAAGAATTGATGATGAAACACTCTCTGTGATCTAA 1128 0.4122 MRTSTHFTSVNVHFLRDYDLILIAHIFPFLEVLDLSLPKNPIELSNCNKSNGPASDLGVKALSLALPNLRKINLSCNIFITDESIFSLCKNSVFLEEVLIFDCHLLTQHGIASTIRQRPNLKSLSVDDFGDIGVSSHFIDSLVSLKSLTCLQLYLSSISDKLLFSIAMEGLPLRKLVLSLSFCSSNYSYTGIRCLLTKCRFVQHLDLQNAKFLNDQHVAELSVFLGDLKFINLRSCRMLTHSAFFALVRNCPLLSEIRMENTHIGEKGVEDSNSLMDFVNTQVKSLHLGHNARLSDENIKIFVSICPNLELLDLSYCRGTSEGIVEVSRRCPNTRHLNLAGYLGVKLHGVNFGMPKLEVLNLSSSRIDDETLSVI* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g02299 375 PANTHER UNCHARACTERIZED 104 368 - -
Rops4g02299 375 Gene3D Ribonuclease Inhibitor 2 130 IPR032675 -
Rops4g02299 375 Gene3D Ribonuclease Inhibitor 131 225 IPR032675 -
Rops4g02299 375 Pfam Leucine Rich repeat 355 370 IPR001611 GO:0005515
Rops4g02299 375 Pfam Leucine Rich repeat 67 89 IPR001611 GO:0005515
Rops4g02299 375 Gene3D Ribonuclease Inhibitor 226 375 IPR032675 -
Rops4g02299 375 SMART LRR_CC_2 66 91 IPR006553 -
Rops4g02299 375 SMART LRR_CC_2 306 330 IPR006553 -
Rops4g02299 375 SMART LRR_CC_2 225 250 IPR006553 -
Rops4g02299 375 SUPERFAMILY RNI-like 20 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g02299 Rops-Chr4 50052025 50053152 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g02299 K10268 - gmx:100819538 377.867