Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g02296 ATGCGTCACTTTTTAGTTTGTGTAAGAATTGTGAGTTTCTTTAAGAGTCTTTCTCTTGCTAATCACTTTGGGTATGGGACCAAAAGAGGGGACTTTGCGAGGCCCCATGTTACTTCACATTTCATTGACTCGTTGGTGAGTTTAAAGAATTTGACTTGTCTTGAATTTCCGTTTTCGAGCATCTCGGATGAGTTGCTATTTTATGTTGCAGAGGAAAGTCTTCCTTTGAGGAAACTTGTCCTCCAAGGCTGCAGCAATTATAGTTATGCTGGAATCTTTTACTTGTTATCAAAGTGTCAATTTGTTCGACATTTGGATCTTCAATCTGCTGAGTTTTTGAATGATCAGCATGCCAATGAGTTGTCTGTGTTTCTTGGTGATTTGATATCTGTAAACCTTAGTGGTTGTAGGATCACTGATTCAGCCTTCTTTGCACTCGTTAGGAACTGTCCTTTGCTCAATGAGATCAAAATGGAGGTAACAGACAGTGGTAAAAAGGGGTTAGAGGATTCTAATTCTTTGATTGATTTTGTTAACCCTCAAGTGAAGTCTCTCCATTTTGCTCACAATTCAAGTTTGAGCCATGAAAGTATCAAAATGTTTGTTTCCATTTGTCCCAATTTACAGCTGCTTGACTTAAGCTATTGCAGGGGCGTACCTGAAGGTATTGTAGAAGTTTTAAGGAGATGTCGTAATATTAGGGATTTGAGCATAGCCTTCTGTTTGGGAGTGAAGCTACATGGGATGAACTTTGATATGTCCAAGCTGGAGGTGTTGAACTTGTCATGGTCAGGAATTGATGATGAAACACTCTCGGTGAGCTCAAAGAGTTGTGGATTATTGCATCTGGACCTAGAAGGTTGTTCTGATATCACGGTGAAGGGAGTGAGGCAAGTGGTAGAAAACTGCACACAACTGAGAGAGATAAATTTGGGGTATTGTCATAAAGTGGCTGCTGATGTTGTTGCTTGGATGGTATTTTCAAGGCCATCTTTGAGAAAAATAACAGCTCCACCTTATTTTCGTTCTAGTGACAGCCAGAGGGAACTCCTCTTGCGTCATGGATGCCTTGTTTGCCAGCAAGCAACATATGCTTATGAGATTCTGGAAGTGCTCTGA 1119 0.4057 MRHFLVCVRIVSFFKSLSLANHFGYGTKRGDFARPHVTSHFIDSLVSLKNLTCLEFPFSSISDELLFYVAEESLPLRKLVLQGCSNYSYAGIFYLLSKCQFVRHLDLQSAEFLNDQHANELSVFLGDLISVNLSGCRITDSAFFALVRNCPLLNEIKMEVTDSGKKGLEDSNSLIDFVNPQVKSLHFAHNSSLSHESIKMFVSICPNLQLLDLSYCRGVPEGIVEVLRRCRNIRDLSIAFCLGVKLHGMNFDMSKLEVLNLSWSGIDDETLSVSSKSCGLLHLDLEGCSDITVKGVRQVVENCTQLREINLGYCHKVAADVVAWMVFSRPSLRKITAPPYFRSSDSQRELLLRHGCLVCQQATYAYEILEVL* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g02296 372 SMART LRR_CC_2 205 229 IPR006553 -
Rops4g02296 372 SMART LRR_CC_2 73 98 IPR006553 -
Rops4g02296 372 SMART LRR_CC_2 125 149 IPR006553 -
Rops4g02296 372 SMART LRR_CC_2 278 302 IPR006553 -
Rops4g02296 372 SMART LRR_CC_2 253 277 IPR006553 -
Rops4g02296 372 SMART LRR_CC_2 303 327 IPR006553 -
Rops4g02296 372 SUPERFAMILY RNI-like 86 335 - -
Rops4g02296 372 PANTHER MITOCHONDRIAL ATP SYNTHASE COUPLING FACTOR B 99 262 - -
Rops4g02296 372 Pfam Leucine Rich repeat 254 269 IPR001611 GO:0005515
Rops4g02296 372 Gene3D Ribonuclease Inhibitor 14 244 IPR032675 -
Rops4g02296 372 Gene3D Ribonuclease Inhibitor 245 356 IPR032675 -
Rops4g02296 372 FunFam F-box/LRR-repeat protein 20 251 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g02296 Rops-Chr4 50014373 50016560 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g02296 K10268 - gmx:100819538 432.18