Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g02292 ATGGCGCTCCTTCTTCGCATCAGAACTAGAACCCACACTGTAACAAACCCTTATCTTCTTCACCACCCCTTCTCCACCACCAACTCCGGCGGAGGAGACAGCGGTGATCAAGATCCTCCAAGTTCCAACTCTCCCTTCTCTTCCTATTTCAAAGATGTCAAGGAGAGCCTCAAAAAACCACAATCAGACTCACCCTCGAACCCTAGATCCTCCAATTTCTCATTCTCCGCTACCTCCAATTCTCAACAAACTTCACTCAATGAGATCATGAAGAATTTATCGGAGTTCCGCCTCCGGACCAACGTGCCGCCGCCGAATGATCCTTCTTCAGCACAGCAAATCTCGTTTCAAGAGATCTACAAGCGAAACATGTTGCAGAAACGCGGCGAATCCACCGGGAATGCCGATTCGGAACCTGCAAAGCGCGCCGGCGGTCAGTTATCCTTCGACGCGATTCGTGGAAGCTTGCAGGGGCTCAGTGGCGATCGCAAGGGCACGGATCGAATGTCGTCGCAGATACTCAAAGACGGGTTGAGATGGAAGCCTACTTCGAACTCGGCGGTGATCGGAGGGACGAGTCCGTTGCCGGAGTCGGTGTTCGGAAGGGAGATGAGGCAGAGGAAAGAGGGGGATGGTCCCTCTGCGGCTATGAAGACGGAATTCTTGAGACCATATGAGCACAGTGAATTGGGAAATAAATTGAGGGACTTGAGGCCTGAGGTAAAAGGAAAAGAGTGGTTTTCTCTTGGTGAGTTGAATGAGAGGTTGATGAGGTTGAGGGAGAAGGAAAAGAAGGAAGCTGAATCCAATGCTAAAGGGGTAAATTTTCAGGTAATTAGAGAATGCCTCACACTTGCGCAGGAAAACGAGGATAACAAGCCAAAGAAAACTCCACTGCACAGACTTGATATGTTGGGCCAGCTGGGTGGGACTCCAAGCTACTTGCTGAAGCCTCCTAAAGAGCATCTTGTTGAAAAGTACTTCCATCCAGATAATATGTCCTCTGCAGAGAAGTTGAAAATTGAGCTTGCGAAGGTTAGAGATGAGTTTCAAATGTCAGAGTCAGATTGTGGTTCTTCTCGTGTTCAAATTGCACAACTGACAACCAAGATTAAGCATCTATCATCAGTTCTACACAAGAAGGATGTGCATTCTCGAAAAGGTCTGCTAGCAATGGTTCAGAAGAGAAAAAGATTACTGAAATACCTCAGAAGAACGGACTGGGATTCGTATTGTTTTGTAATCTCTAAGCTAGGTCTACGTGATAATCCTGATTATAGTCATAAAATTCGGTCAAAAGCTCGATCCCGTGAGATGGCCAGTTGA 1326 0.4744 MALLLRIRTRTHTVTNPYLLHHPFSTTNSGGGDSGDQDPPSSNSPFSSYFKDVKESLKKPQSDSPSNPRSSNFSFSATSNSQQTSLNEIMKNLSEFRLRTNVPPPNDPSSAQQISFQEIYKRNMLQKRGESTGNADSEPAKRAGGQLSFDAIRGSLQGLSGDRKGTDRMSSQILKDGLRWKPTSNSAVIGGTSPLPESVFGREMRQRKEGDGPSAAMKTEFLRPYEHSELGNKLRDLRPEVKGKEWFSLGELNERLMRLREKEKKEAESNAKGVNFQVIRECLTLAQENEDNKPKKTPLHRLDMLGQLGGTPSYLLKPPKEHLVEKYFHPDNMSSAEKLKIELAKVRDEFQMSESDCGSSRVQIAQLTTKIKHLSSVLHKKDVHSRKGLLAMVQKRKRLLKYLRRTDWDSYCFVISKLGLRDNPDYSHKIRSKARSREMAS* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g02292 441 MobiDBLite consensus disorder prediction 127 149 - -
Rops4g02292 441 Pfam Ribosomal protein S15 345 421 IPR000589 GO:0003735|GO:0005840|GO:0006412
Rops4g02292 441 SMART Ribosomal_S15_2 343 421 IPR000589 GO:0003735|GO:0005840|GO:0006412
Rops4g02292 441 Gene3D - 388 423 - -
Rops4g02292 441 Gene3D - 339 386 - -
Rops4g02292 441 NCBIfam 30S ribosomal protein S15 344 421 IPR005290 GO:0003735|GO:0005840|GO:0006412
Rops4g02292 441 Hamap 30S ribosomal protein S15 [rpsO]. 333 422 IPR005290 GO:0003735|GO:0005840|GO:0006412
Rops4g02292 441 MobiDBLite consensus disorder prediction 60 84 - -
Rops4g02292 441 Coils Coil 336 356 - -
Rops4g02292 441 MobiDBLite consensus disorder prediction 19 50 - -
Rops4g02292 441 Coils Coil 249 269 - -
Rops4g02292 441 MobiDBLite consensus disorder prediction 19 84 - -
Rops4g02292 441 CDD Ribosomal_S15p_S13e 345 419 IPR000589 GO:0003735|GO:0005840|GO:0006412
Rops4g02292 441 PANTHER S15/NS1, RNA-BINDING PROTEIN 1 428 - -
Rops4g02292 441 SUPERFAMILY S15/NS1 RNA-binding domain 343 422 IPR009068 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g02292 - - cpap:110821075 424.476