Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g02276 ATGTCTTCTCTAAGATACACCATGTCAGACAATTTTAAATCAAACTTTGATGAGGTAAGATGGGTGATTAACATCCGTAAAACCCTTGAAGAAGAGCTTGAGGAAGATGGTGAATTTTCTGTATCCATCTTCAATGTGCCCAAGCTCCTTATGGCTAGTGATCCAGAATCTTATGTTCCTCAACAAGTTGCTATTGGTCCTTACCATTATTGGCGTCCAGAGCTGTATGAAATGCAAAGGTACAAGCTTGCAGCAGCAAAAAGATTCCAGAAACAACTACAATGCCTCAAGTTAGAAAACCTTGTTGACCAATTGACAAAGTTGGAGCAAAGGATTCGAGCATGCTGCCACAAGTTCTTGGATTTCAATGGCGAAACATTGGTGTGGATGATGACAGTTGATGCCTCATTCTTACTTGAGTTCCTTCAAGTCTATTCCATTCAAGAAGGAACAAAGGTACCTGGGGTTTCCTCTAGCTTGTCTCATTTGGTAGACTATGCTGGGAGGAAATCAGCTCATAATGCAATTTTGAGGGACATTGTAATGCTTGAGAATCAAATCCCATTATTTGTGTTGAGAAAGATGCTGGAGTTCAAACTATCATCACTAGAAGCTGCAGATGACATGCTGTTCTTGATGATTACAGGGTTGTTTAAAGAGATTTCTCCTTTCAAGATGATTGAGGAGTTTCCAAACATTAAGGTCTCAGAGAGTGCTCATTTGCTAGATTTCTTGTATGATGTGATTGTACCAAAATTAGATCAACAGCCTGACATAATTGAAGTTGAGTTTCAACAAGAAGAGGGAAAGGAAGGGAATGACAAATCAACAGGTGACTCCAGCCAAGTTAAGAAATTCTTTAAAGAACTATGGAAGGTGCTTTCAAAATTAAACAAGGGGCCTGTGAAATCAATCAAAAAGGTACTTGTATCTAGACCTTTGAAAGTCTTAGTTAAGTTGCCTTGGAAAATCATATCCAATCTTCCAGGAGCTAAACTTCTAGCACAACCAGTTGAAAACTTATATTTTTCTCAAGCAAAAGGAGATGAAAAACCAGAAAATGGGAATTCAAGCTCAAAAAGTCTTAAGAACAAGCCATCCTCCGTGGAGGAAATCACTATTCCTTCTGTTTCAGAACTCTTGAATTCCGGGGTTCGTTTCTTAGCCACCAAGGGAAGCATATCAAACATTAGTTTCGATGTGAAAACATGCACGTTTTACCTTCCCACCATAGGTTTGGACGTTAACACTGAAGTTTTCCTGAGAAACTTGGTTGCATATGAAGCATCAGTTGGATCAGGGCCTTTGGTAATAGCCCGCTACACTGAATTGATGAATGGGATTATAGACTCAGAAGAGGATGCAAAGATTCTCAGAGAAAAAGGGATTATTCTGAACCACTTGAAGAGTGATCAAGAGGTGGCTAACCTGTGGAATGGGATGAGCAAGTCCCTGAGATTGTCAAAAGTGCCATTCTTGGATAAGGTCATTGAAGATGTTAACAAGTTTCATAATGGCAGAATGAAGGTCAAGATTGGGAAATTCATGAAGGTTTATGTGTTTGGTTCTTGGCAGTTTTTGACATTCCTAGCTGCTATCTTCCTCTTGTTTTTGACGGCATTGCAAGCCTTCTGCTCTGTCTATACCTGTAATCGCATTTTACACTCGGCACTAGAAACCACTGATTGA 1689 0.3961 MSSLRYTMSDNFKSNFDEVRWVINIRKTLEEELEEDGEFSVSIFNVPKLLMASDPESYVPQQVAIGPYHYWRPELYEMQRYKLAAAKRFQKQLQCLKLENLVDQLTKLEQRIRACCHKFLDFNGETLVWMMTVDASFLLEFLQVYSIQEGTKVPGVSSSLSHLVDYAGRKSAHNAILRDIVMLENQIPLFVLRKMLEFKLSSLEAADDMLFLMITGLFKEISPFKMIEEFPNIKVSESAHLLDFLYDVIVPKLDQQPDIIEVEFQQEEGKEGNDKSTGDSSQVKKFFKELWKVLSKLNKGPVKSIKKVLVSRPLKVLVKLPWKIISNLPGAKLLAQPVENLYFSQAKGDEKPENGNSSSKSLKNKPSSVEEITIPSVSELLNSGVRFLATKGSISNISFDVKTCTFYLPTIGLDVNTEVFLRNLVAYEASVGSGPLVIARYTELMNGIIDSEEDAKILREKGIILNHLKSDQEVANLWNGMSKSLRLSKVPFLDKVIEDVNKFHNGRMKVKIGKFMKVYVFGSWQFLTFLAAIFLLFLTALQAFCSVYTCNRILHSALETTD* 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g02276 562 MobiDBLite consensus disorder prediction 350 367 - -
Rops4g02276 562 Coils Coil 98 118 - -
Rops4g02276 562 MobiDBLite consensus disorder prediction 347 367 - -
Rops4g02276 562 Pfam Plant protein of unknown function 43 538 IPR004158 -
Rops4g02276 562 PANTHER PROTEIN, PUTATIVE (DUF247)-RELATED-RELATED 36 547 IPR004158 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g02276 Rops-Chr4 49587843 49589531 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g02276 - - gmx:100779984 865.144
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops4g02276 4 49587843 49589531 Rops4g02276 4 49587843 49589531 ECH