Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g02271 ATGATCGGTGTCGAAAACTCGAGTTCTTTTGGCGGAAATTGTAGTCTGAATAATGATGATGATGATGATAATTGTAGTCTGAATAATTATGATGATGATGATGATTGTAGTCTGAATAATTATGATGATGCTGATGATGATAATTGTAGTCTGAATGATGATGATGATAATTGTAGGCTGAATAATGATGATGCTGATGATGATAATTGTAGTCTGAACAATGATGATGATGAAATTGGAATTTCTGATAAGAATGAAATTGTCAAATACATTTTTTTGTTTCGAAAATTAACAGAGAATACACATGCATGCGAATCATATCTAGAGTATGAGAGATTAAGAGGAGGAACTCTAGTGAGGAAGCTAAGGTCTCCTTCAATGATCAAGTCTTTTGTTTGGACAGTGATTCTAAAGGTTTTGGAAATTGGAAGGAACAAGAATGGCAAAACTTTATCCTTGTATTTCTATGATAATTTAAATTTGATGGATTCCAATAATTGGGGACCTAATCAGGGTACTGAACCTACTATCAACACAAGTGACTGGAGAGCTCAACTGCCACCTGGTTCACGCCAACGAATTGTTAATAAAATAATGGACACATTAAAGAAACATCTTCCTGTTTCTGCTTCTGAGGGATTAAATGAACTTCACAATATTGCTCAAAGGTTTGAAGAGAAGATTTTTAATGCTGCAACAAGCCAGCCTGATTATCTACGGAAAATATCTATGAAGATGATAACAATGGAGACTAAATCTCAAAATACCATGGCCAACAATATGCAATCAAATCAAGGTGGCCCTAGCAATAAACCTCCTGATCAAGGTCTTGTTTTGCAGCCTCAAGTTCATAATCCAGGGCAGCAACATACTATTCCTTTGTCTAGTCAGACCCAGCCCCATCAGCAGCTTCTATCTCAGAACATTCAAAGTAACATTGCACCTGTATCTAGTCTAGCTCAGACTCCCAACCAAAATATTGGCCAGAATTCCAACATACAGAATATACCTGGGCAAAATTCAATGGGTAGCACTAATGGCCAAAATTCCAACGTACAGAACATGTTTCCTGGTTCTCAGAGAAGGCAGCAGGTTGTTCCCCAACAGCAACAGCAGCAATCACAGAATCAACAACAGTATCTTTACCAACAGCAGCTTTTGAAGCAGAAGCAGAAGCTGCAATCTCAGATTCAGCAGCAACAACAGCAGAACCTTCTGCAACCAAATCAGTTGCAATCTTCTCAGCAATCTGTTATGCAAACGTCATCTGTTATGCAGCCTTCCATGATGCAAACATCTCTATCTAGCCTTCCACAGAATCAGCAGTCTAATAGTGTTCAACAGTCAATGCTTAAGCAACATTCCCAAGTTATCAGGCATCAGCAACAACAGACTGCCATTGTTCATCAGCAACAAACACCAATGACTCAACAGCCAATATTGCCTGCACAGCAGCAGCTTATGGGGCCTCAGTCAAATGCAACAAACATGCAACAACAACGTGCACAGATGCTTGGGCCACAGAACAATGTTGGTGACATACAGCAACCACCGAGGTTGCTTTCACAGCAGAATAATCTTACAAACCTGCAACAGCGACAACAACAGCAACAATTAATAAATCAACAAAACAATCTAACAAACATACATCAACAACAATTGGGAAATAATGTCCCTGGGTTACAGCAGCAACAGCCAGTTGGACCTGAATCTGGAAACCCAGGCATGCAAACAAGTCATCATTCTGCACACATGCTACAACAACCAAAGGTCCCAATGCAGCAACAATCTCAACAAAATGCATCAAATTTGTTACCATCTCATGCGCAGCAGCAGTCACAGCAACAGGCTTCCCAGCAGCAATTAATGCCACAGATTCACACTCAGCCTGCACAGATGCAACAGCAGTTGGGTTTGCAGCAGCAGCCAAATCCCTTGCAACGAGATAGGCAGCAAAGACTTCAAGCATCAGGGTCTTTACTTCAACAGCAAAATGCTCTTGATCAACAAAATCAGTTATATCAATCTCAAAGAGCTCTTCCAGAAACATCAACTTCTCTGGATTCTACTGCACAACCAAGTGGGGTTGATTGGCGAGAAGAAGTGTACCAAAAGATCCAAACCATGAAAGAAAAGTACTTGACAGAGTTGAAAGAAATATACCAGAAAGTTGCTGCTAAACTTCAGCAGCATGACTCTCTTCCCCAACAACCGAAGTCAGATCAGATTGAAAAACTGAAGATATATAAAATGATGGTGGAGCGTAAGATGGTATTCCTACAGGTTCCCAAGAACAACATTATGCCTAATTTCAATGAAATTTTGGGAACATATGAGAAGCAGATTATAAATATCATAAATACAAATAGGCCTAGGAAAGCCATGTCTTCGCTGCAGCCAGGACAGCTTCCCCCAACTCATATGCCCTCCATGCCACAGCCACAATCCCAAGTTACTCAAGTACAGTCTCATGAAAATCAAATAAACTCTCAGTTGCAGCAATCAAATTTACAAGGTTCTGTAGCAACAATGCAGCAGAATAATATTGCTAACTTGCAGCACAATTCTATGTCTGGTGTATCAACAGCACTGCAGAATATGATGAATTCCATGCAACCCGGTACTAATTTAGATTCTGGGCAGGGAAATTCTGTGAACTCCCTGCAACAGGTTCCAGTGAGCTCCCTTCAACAAAACCCTGTTAGTACTCCTCAACAGACTAACATCAATTCCTTATCGTCACAAGGTGGGGTAAATGTGATCCAATCCAATCTAAATACCCTTCAGTCAGGTTCCAGTATGCTTCAACACCAACTGAAACATCAGCAGGAACAGAAAATGCTGCAGAGTCAACAATTGAAACAACATCAACAGCGACAATTGATGCAAAGGCAGCAGATCCTCCAGCAGCAACAACTGTCTGCACAATTGCAGACCCATCAAATGCGACAAGGAATGGGTGTTAAGCCAGGGGTCTTTCAGCAACATCTTACCTCAGGTCAACACTCAGCTTATTCCCAACAACAGTTGAAACAAGGAGGTGCATTTCCTGCTTCTTCACCCCAACTCCTTCAGGCTGCATCTCCTCAGATTCCTCAACATTTGTCTCCCCAGGTTGACCAACAAAATCATTTTCCATCTCTAACAAAAGTCTCAACTCCTCTGCAATCTTCTAATTCACCTTTTGTAGCCCCTACTCCTTCACCTCCTATGGCTCCATCTCCTATGCCAGGAGATCCTGAGAAGCCCATTCCTAGTGTTTCATCAATATCAAATGCTGCAAATGTTGGACATCAACAAACAGGGGGCGCAGCAGCACCAGCTCAATCCCTTGCCATTGGGACTCCTGGGATATCAGCCTCTCCTTTATTGGCAGAATTCAGTGGTCCAGATGGTGCTCATGGTAATGCTTTAGCGGCTACTTCTGGGAAGTCAACTACAGAGCAGCCTCTTGAACGTCTAATTAAAGCGGTGAAATTGATGTCAACTAAAACGTTAACTGCCGCTGTCAATGATATTGGTTCAGTTGTCAGCATGAATGATAGGATGGTGGGATCAGCTCCAGGTAATGGATCCAGAGCAGCTGTTGGTGAGGATTTGGTTTCCATGACTAATTGCCGTCTTCAGGTTAGAAATTATATTACTCAAGATGGTATCAATGGAATTAAGAGGATAAAGCGCTGCACTAGTGCTAGACCCTTAAATGTTGTATCATCTGCTGGTAGCATGAATGATAGTATCAACCAGTTAACTGCTTCAGAGGCTTCTGATATGGAGTCAAGTGCAACATCTGGTGTGGAGAAGCCAAAGATTGTGGTGAGTCATACCCTTTTGGAAGAAATAACGGAAATTAATAACCGACTTATTGACACAGTAGTAGACATAAGTGATGAAGATGTCAATCCAACTGCAGTTGCTGTTGCTGTTGCTGCTGGAGGGGCAGAAGGAACCGTTGTCAAATGTTCTTTCACTCCTGTGGCTCTCAGTCCAACCTTTAAATCCCACTATGCTTCGCAGATGTCACCTATTGAGCCCCTGCGTTTGCTGGTTCCTCCGAATTATCCTGATTGTTCTCCCATACTGCTAGACAAGTTTCCAGATGAATCCAGTGGGGGGAATGAAGATCTTTCAGCGAAGGCAAAGTCAAGGTTTAGCGTATCCTTGCGTAGTTTATCTCCACCTATATCCCTCCGGGAGATAGCAAAGACTTGGGATGCTTGTATTCGCAGTGTTATTACTGAGTATGCACAACAGAGGGGCGGAGGAAGCTTCAGCTCTAAGTATGGAACTTGGGAAAGTTGCTTGACTGCATCATGA 4317 0.42 MIGVENSSSFGGNCSLNNDDDDDNCSLNNYDDDDDCSLNNYDDADDDNCSLNDDDDNCRLNNDDADDDNCSLNNDDDEIGISDKNEIVKYIFLFRKLTENTHACESYLEYERLRGGTLVRKLRSPSMIKSFVWTVILKVLEIGRNKNGKTLSLYFYDNLNLMDSNNWGPNQGTEPTINTSDWRAQLPPGSRQRIVNKIMDTLKKHLPVSASEGLNELHNIAQRFEEKIFNAATSQPDYLRKISMKMITMETKSQNTMANNMQSNQGGPSNKPPDQGLVLQPQVHNPGQQHTIPLSSQTQPHQQLLSQNIQSNIAPVSSLAQTPNQNIGQNSNIQNIPGQNSMGSTNGQNSNVQNMFPGSQRRQQVVPQQQQQQSQNQQQYLYQQQLLKQKQKLQSQIQQQQQQNLLQPNQLQSSQQSVMQTSSVMQPSMMQTSLSSLPQNQQSNSVQQSMLKQHSQVIRHQQQQTAIVHQQQTPMTQQPILPAQQQLMGPQSNATNMQQQRAQMLGPQNNVGDIQQPPRLLSQQNNLTNLQQRQQQQQLINQQNNLTNIHQQQLGNNVPGLQQQQPVGPESGNPGMQTSHHSAHMLQQPKVPMQQQSQQNASNLLPSHAQQQSQQQASQQQLMPQIHTQPAQMQQQLGLQQQPNPLQRDRQQRLQASGSLLQQQNALDQQNQLYQSQRALPETSTSLDSTAQPSGVDWREEVYQKIQTMKEKYLTELKEIYQKVAAKLQQHDSLPQQPKSDQIEKLKIYKMMVERKMVFLQVPKNNIMPNFNEILGTYEKQIINIINTNRPRKAMSSLQPGQLPPTHMPSMPQPQSQVTQVQSHENQINSQLQQSNLQGSVATMQQNNIANLQHNSMSGVSTALQNMMNSMQPGTNLDSGQGNSVNSLQQVPVSSLQQNPVSTPQQTNINSLSSQGGVNVIQSNLNTLQSGSSMLQHQLKHQQEQKMLQSQQLKQHQQRQLMQRQQILQQQQLSAQLQTHQMRQGMGVKPGVFQQHLTSGQHSAYSQQQLKQGGAFPASSPQLLQAASPQIPQHLSPQVDQQNHFPSLTKVSTPLQSSNSPFVAPTPSPPMAPSPMPGDPEKPIPSVSSISNAANVGHQQTGGAAAPAQSLAIGTPGISASPLLAEFSGPDGAHGNALAATSGKSTTEQPLERLIKAVKLMSTKTLTAAVNDIGSVVSMNDRMVGSAPGNGSRAAVGEDLVSMTNCRLQVRNYITQDGINGIKRIKRCTSARPLNVVSSAGSMNDSINQLTASEASDMESSATSGVEKPKIVVSHTLLEEITEINNRLIDTVVDISDEDVNPTAVAVAVAAGGAEGTVVKCSFTPVALSPTFKSHYASQMSPIEPLRLLVPPNYPDCSPILLDKFPDESSGGNEDLSAKAKSRFSVSLRSLSPPISLREIAKTWDACIRSVITEYAQQRGGGSFSSKYGTWESCLTAS* 1439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g02271 1438 Gene3D Coactivator CBP, KIX domain 181 260 IPR036529 GO:0003712|GO:0006355
Rops4g02271 1438 MobiDBLite consensus disorder prediction 1063 1082 - -
Rops4g02271 1438 MobiDBLite consensus disorder prediction 793 814 - -
Rops4g02271 1438 MobiDBLite consensus disorder prediction 281 304 - -
Rops4g02271 1438 SUPERFAMILY Kix domain of CBP (creb binding protein) 179 255 IPR036529 GO:0003712|GO:0006355
Rops4g02271 1438 Coils Coil 383 403 - -
Rops4g02271 1438 MobiDBLite consensus disorder prediction 258 304 - -
Rops4g02271 1438 Pfam KIX domain 180 259 IPR036546 -
Rops4g02271 1438 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 15A-RELATED 178 483 IPR044661 GO:0003713|GO:0031490
Rops4g02271 1438 Coils Coil 939 959 - -
Rops4g02271 1438 MobiDBLite consensus disorder prediction 321 372 - -
Rops4g02271 1438 FunFam Mediator of RNA polymerase II transcription subunit 15a 181 259 - -
Rops4g02271 1438 MobiDBLite consensus disorder prediction 411 446 - -
Rops4g02271 1438 MobiDBLite consensus disorder prediction 558 653 - -
Rops4g02271 1438 MobiDBLite consensus disorder prediction 1049 1089 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g02271 Rops-Chr4 49476320 49493160 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g02271 K14972 - gmx:100805336 1514.98