Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g02261 ATGTCGAAGGACGATGTTTACATTGGAGCAATTGACCAAGGAACCAGCAGCAGCAGGTTCATAATCTATGACAAAACGGGTCACCCTATTGGATCTCACCAGGCCGAGTTCACTCAGTTCTACCCACAAGCTGGGTGGATGGAGCATGATCCCATGGAGATCTTGGAGAGTGTGAAGGTTTGTCTTGCTAAGGCTGTGGACAAGGCTACTGCTGATGGGTTCAATGTGGATAAGGGGTTGAAGGCTATTGGTATCACCAATCAGAGGGAGACCACTTTGGTTTGGAGCAAATCCACTGGTGTTCCTCTTTACAATGCTATTGTTTGGATGGATGCTCGCACTGCTTCTATTTGCAGGAAACTGGAAAGTGAGTTATCCGGTGGCAGATGTCATTTTGTGCAGAGTTGTGGTTTGCCTATTAGCACATATTTTAGTGCTGTGAAACTGCTGTGGTTGATGGAAAACGTGGACGCTGTCAAGGATGCTATAAAGAAAAAGGATGCCCTGTTTGGAACCATAGACACTTGGTTGATATGGAATTTAACTGGTGGATTGAAAGGAGGTTTGCATGTTACTGATGTTTCAAATGCAGCCCGGACAATGCTGATGAATCTAAAAACTCTTGATTGGGATGCATCTACCTTAGAAACCCTTGGAATCCCTTCTGAAATATTGCCTAAAATTGTTAGTAATTCTGAAATTATAGGAGATATTGCTGCTGGATGGCCAATTACTGGTGTCCCTATCTCTGGATGTTTAGGGGATCAACATGCAGCAATGCTAGGACAAGCATGCCGTAAAGGAGAGGCTAAAAGCACTTATGGCACAGGTGCTTTCATACTAATAAATACTGGTGAAGGGATAATTCAATCAAAGCATGGTCTTCTATCCACTGTTGCCTTCAAGCTTGGTCCAAAAGCTCCAACCAATTATGCACTGGAAGGATCAGTTGCTATTGCTGGAGCTGCAGTGCAGTGGCTTAGAGATGGTCTTGGGATCATTTCTACTGCATCAGAGATAGAGGATCTGGCATTACAGGTTGAATCCACGGCTGGTGTTTACTTTGTTCCTGCTTTCAATGGATTGTTTGCCCCATGGTGGCGTGATGATGCTCGTGGGGTTTGTGTTGGAATAACAAGGTTTACCAACAAGGCTCACATTGCTCGAGCCGTGCTTGAGAGCATGTGTTTTCAAGTGAAAGATGTCTTAGATTCAATGCAGAAAGATTCAGAGGAAGCTGAATCCAAGAAAGATGAGTTTTTGCTTAGAGTGGATGGTGGGGCAACTGTTAACAACCTGATGATGCAGATTCAGGCAGATTTGATGGGCAGTCCTGTAATTAGACCTGCTGACATAGAGACAACAGCACTTGGAGCAGCCTATGCAGCTGGATTAGCTGTAGGGGTTTGGACAGAAGATTTTATTTTCGATTCTAAGGAGAGGATGAAGAATGCTAATGTTTTCTGTCCAGTGATGGCCGAGGAAGAGAGGAAAAAGAAAGCGGACCATTGGTGCAAAGCTGTTAGTAAAACATTTGAGTTGGCGGAGCTTACCCTTTGA 1560 0.4436 MSKDDVYIGAIDQGTSSSRFIIYDKTGHPIGSHQAEFTQFYPQAGWMEHDPMEILESVKVCLAKAVDKATADGFNVDKGLKAIGITNQRETTLVWSKSTGVPLYNAIVWMDARTASICRKLESELSGGRCHFVQSCGLPISTYFSAVKLLWLMENVDAVKDAIKKKDALFGTIDTWLIWNLTGGLKGGLHVTDVSNAARTMLMNLKTLDWDASTLETLGIPSEILPKIVSNSEIIGDIAAGWPITGVPISGCLGDQHAAMLGQACRKGEAKSTYGTGAFILINTGEGIIQSKHGLLSTVAFKLGPKAPTNYALEGSVAIAGAAVQWLRDGLGIISTASEIEDLALQVESTAGVYFVPAFNGLFAPWWRDDARGVCVGITRFTNKAHIARAVLESMCFQVKDVLDSMQKDSEEAESKKDEFLLRVDGGATVNNLMMQIQADLMGSPVIRPADIETTALGAAYAAGLAVGVWTEDFIFDSKERMKNANVFCPVMAEEERKKKADHWCKAVSKTFELAELTL* 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g02261 519 PANTHER SUGAR KINASE 7 513 - -
Rops4g02261 519 SUPERFAMILY Actin-like ATPase domain 7 265 IPR043129 -
Rops4g02261 519 Coils Coil 403 423 - -
Rops4g02261 519 Gene3D - 2 262 - -
Rops4g02261 519 NCBIfam glycerol kinase GlpK 7 512 IPR005999 GO:0004370|GO:0006072
Rops4g02261 519 Pfam FGGY family of carbohydrate kinases, N-terminal domain 7 262 IPR018484 GO:0005975|GO:0016301
Rops4g02261 519 SUPERFAMILY Actin-like ATPase domain 265 511 IPR043129 -
Rops4g02261 519 FunFam Glycerol kinase 5 263 - -
Rops4g02261 519 Gene3D - 264 514 - -
Rops4g02261 519 PIRSF GlpK 5 518 IPR000577 GO:0005975|GO:0016301
Rops4g02261 519 ProSitePatterns FGGY family of carbohydrate kinases signature 1. 143 155 IPR018483 GO:0005975|GO:0016773
Rops4g02261 519 Pfam FGGY family of carbohydrate kinases, C-terminal domain 270 466 IPR018485 GO:0005975|GO:0016301
Rops4g02261 519 FunFam Glycerol kinase 264 514 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g02261 K00864 - gmx:547750 892.493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops4g02261 4 49315836 49319079 Rops4g02261 4 49315836 49319079 ECH