Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g02259 ATGGCTTCTTCTAACACCAGCACCACCACCACAACCCTTCACTCACCGACAACACCAAACACCACCTTCGTCCAAGCTGACCCATCAAACTTCAGAGCAGTGGTTCAGAAACTAACCGGAGCATCAGAAGACCCTTCAGCTCAGAAACTTCCCCTCACTCTCCCTTCACGTGTCGCAGCCGCACAAACTCTCCGGCCACCGGTCACCGTCGGCGAGTTAATGGGCCCGAAGAAGCCAAACTTCAAGCTCCATGAACGACGAGCCAAGAAGCTTGAACTAAACATAGGTGTTTCTCAACATCATGGGAACATCATGAGCATGTACCTTAGAGAGGGCATGGTTATGGCTTCACCTGTTTCACCTTTGGAGATGTTGACACGTGGAAGCCCTCGAACACCAAAGTCACCACATGAAGAAGAAGAAGAAGCCATAGCTGAGAAAGGGTTCTACTTGCACCCTACTACTCCTAGAGCTTCTCAACCTCCTCAGTTATTGCCACTCTTTCCTTTGCATTCTCCTTCTTCTCACAATAATACCAATTCTTCTTATTCTTAA 555 0.4847 MASSNTSTTTTTLHSPTTPNTTFVQADPSNFRAVVQKLTGASEDPSAQKLPLTLPSRVAAAQTLRPPVTVGELMGPKKPNFKLHERRAKKLELNIGVSQHHGNIMSMYLREGMVMASPVSPLEMLTRGSPRTPKSPHEEEEEAIAEKGFYLHPTTPRASQPPQLLPLFPLHSPSSHNNTNSSYS* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g02259 184 MobiDBLite consensus disorder prediction 170 184 - -
Rops4g02259 184 MobiDBLite consensus disorder prediction 124 184 - -
Rops4g02259 184 MobiDBLite consensus disorder prediction 132 147 - -
Rops4g02259 184 MobiDBLite consensus disorder prediction 1 25 - -
Rops4g02259 184 Pfam VQ motif 18 45 IPR008889 -
Rops4g02259 184 PANTHER VQ MOTIF-CONTAINING PROTEIN 11-LIKE 4 176 IPR039611 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g02259 Rops-Chr4 49305974 49306814 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g02259 - - gmx:100802153 185.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops4g02259 4 49305974 49306814 Rops4g02259 4 49305974 49306814 ECH