Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g02258 ATGGCCCCAAGACCAGGGAAAGGAAAATCAAATAAAGCTAAGGCAGAGAAGAAGAAAAAGGAAGAGAAAGGTGTAGCTCCTTCTCTTATTGACATCACTGTGGTCACTCCCTATGATTCACAGCTTGTATTGAAGGGTATCTCTACTGATAAGATACTTGATGTAAGAAAGCTATTGGCTGTGAAGGTGGAGACATGCCATTTTACAAACTATTCTTTATCACACGAGGTTAAAGGTCAGAGATTAAATGACAAAGTTGAAGTTGTTACCCTAAAGCCATGTCTTCTAAGAATGGTTGAAGAGGATTACACAGAGGAAGCCCAGGCAGTTGCACACGTGCGAAGGCTATTGGACATTGTGGCCTGCACAACCAGGTTCGGGAAGCCCAAACGAGGCCTGCCAAGCCCAGACTCAAAGCCCAAGAAAAACGGAAAGGCCCAAAATCATAGTAAGACCAATCTGAGCCCACCGGCGACACCCAATGGATTGTCGGAGCCGCCATCATCGCCTATTTCCGATAACGTGGGCATGGTGGCCATTCACCCAACGCCGAAGCTCTCAGATTTTTATGAGTTCTTCTCGCTCTCTCACCTCTCTCCCCCAATTTTACATTTGAAGAGATGTGAACTGAAGGACGAAGATGATAGACGCAAAGGAGATTACTTTCAGCTTCAGGTTAAAATATGCAATGGGAAGGTAATCGAGGTGGTTGCTTCAGAGAAAGGGTTTTACAGTGTAGGAAAGCTGTCTCTGCAGAGCTACACATTGGTTGATCTTCTGCAACAGCTCAGTAGGGGTTTTGCTAACGCATATGGATCGTTGATGAAAGCTTTTTTGGAACGCAATAAGTTTGGCAATCTTCCCTATGGATTCCGAGCAAATACATGGCTGGTGCCTCCATCTGTTGCTGAGTCTCCTTCAAACTTTCCATCCCTTCTCGCTGAGGATGAAAACTGGGGTGGTAATGGTGGTGGTCAAGGAAGAAATGGTGAATATGATCTTAAACCATGGGCAACAGATTTTGCAATATTGGCTTCTCTTCCTTGCAAAACTGAGGAAGAGAGAGTGATGAGAGATAGAAAAGCTTTTCTGCTTCACAGTCAGTTTGTTGATACCTCAATCTTTAAGGCAGTTGCAGCTATACAGCATGTCATGGAGACCAAGTCAAATATGAAGAATGGATTGAATTCTTCTCCTGGTTCAATTCTGCATGAAGATCACGTGGGAGACTTGTCCATTGTAGTCCAACGTGATATCCAAGGTGGAACTAAAAAGTATGATTCTATACTGATTGAATCCAGTATTCATAAGCAGGATGCTAAGAAGAATTTAATCAAAGGGTTGACAGCAGATGAGAGTGTCATTGTTAATGATACTTCTTCTTTGGCTCTCGTTGTTGTACACCACTGTGGATATACAGCAACAGTAAGGGTTGTGGGAAATGTGAACGTGAGGAAGACTAAAGTTCGAGATATTGAGATAGATGATCTGCCAGATGGAGGGGCAAATTCTCTCAATATAAACAGTTTGAGGCTACTGCTTCACAAGTCTGGAGCTGAGTCATCAGAAGGGACTTTATCTCCCCCGTCAAATTTGGATGACTTAGATGCTTCTAAATATCTTGTTCGGAAGGTGGTTCAAGATTGCATGGAAAAGATAAAGGAGGAGTCAATTGTATCAAAAAGGTCTATTCGATGGGAACTTGGTTCCTGTTGGGTGCAGCATCTGCAAAAACAGGAAACTTCAACTGATAACAGTTCAAAAAGTAAAGAAGATAGCAATGAAGTTGAACATGCTGTTAAAGGTCTTGGAATGCAATTTAAATTTTTGAAGAAAAGGGAAAAGAAACCAAGCAATTTAGATGGTGCAGATTCCAAGGAGAAAAATGACTCTAGACCTGGAAACGTGAATTTGGGTGCTGATAAAGTTGAGTCAAACAACAATGACTCATGTAGCTCTAATGAATTGGAGAAAATACTTTCTGAAGAAGCATTTTTGCGTCTCAAAGAATCTGGAACTGGTCTTCATATAAAGTCAGTGGATGAGCTTATCAACATGGCACACAAATTTTATGATGAAGTTGCCTTGCCGAAGCTGGCTACGGACTTTGGATCACTTGAACTTTCTCCTGTGGATGGTCGTACACTGACAGACTTTATGCATTTAAGAGGATTACAGATGCGATCACTGGGTGAAGTGGTTGAACTGGCAGAGAATCTTCCACACATACAATCCCTTTGTATTCATGAGATGATTACTCGAGCTTTCAAGCATCTACTTAAAGCAATTATTGCATCTGTTGACAATGTAGCAGACTTACCTTCAGTCGTTGCATCAGCCTTGAATTTCTTACTTGGAGGGTGTCGAATGGAAGATACTGAACAAACTTTGGTGGATGATCATCATCTCAGAACTCAGTGGTTACGCGTATTTTTGTCCAAAAGATTTGGATGGACATTAAATGATGAATTTCAACATTTGAGGAAGTTATCAATTCTCAGAGGGCTCTGTCACAAGGTTGGATTGGAATTGGTCCCTAGAGATTATGACTTGGAATCCCCTAAGCCCTTTGGGAAGTATGATATTATCAGCCTGGTTCCTGTTTGCAAGCATGTAGGGTGCTCCTCAATAGATGGACGCAATTTATTGGAATCATCCAAAATTGCTCTGGATAAAGGGAAGCTTGAGGATGCTGTAAATTATGGAACAAAGGCATTGGCAAAGATGATGGCTGTTTGTGGTCCCTATCATCGAAATACTGCAAGTGCATATAGTCTTCTTGCTGTGGTTCTCTACCACACTGGAGACTTTAACCAGGCTACCATTTATCAGCAAAAGGCCTTGGATATAAATGAAAGGGAGCTTGGCCTTGATCATCCTGACACAATGAAAAGCTATGGGGATCTTTCTGTTTTCTATTATCGTCTGCAACACATAGAACTGGCTCTGAAGTATGTTAATCGTGCTCTATTCCTCCTTCATTTCACATGTGGGCTGTCTCATCCAAATACAGCTGCAACTTATATAAATGTGGCCATGATGGAAGAAGGCATGGGAAATGTTCATGTGGCACTCAGATACTTGCATGAAGCTCTTAAATGCAACAAAAGATTGTTAGGAGCAGATCATATACAGACTGCTGCAAGCTATCATGCCATTGCTATAGCTCTTTCATTGATGGAAGCATATTCTCTGAGTGTGCAACATGAACAAACTACACTTAAGATACTTCAATCAAAGCTTGGGTCTGAAGATCTCCGTACACAGGATGCTGCCGCATGGCTTGACTATTTTGAATCAAAAGCCATAGAGCAGCAAGAAGCAGCTAAAAATGGAACTCCAAAGCCAGATACATCCATTGCAAGTAAAGGTCACCTTAGTGTGTCAGATCTCATGGATTTTATAAGCCCTGACAATGATTCAAAAGGAAATGATGCTCAGAGGAAACACAGGCGTGCAAAGACACTCCCAATAAGTGATAACAACCGTCAAGAACATGACGATGCAATAGCTGATGAGGGCATTCTTTTTGATAACTCAAATGATGCTACAACTATGGTACAAGGCAATATAGAAGAAACAAATGGCACACTTGATTCTGAAGAAGTGAAAGAAAATGGTGATCTTACTAGCTATAAGCTGGTGACAAGTGAAGCTGTTTATGATACATCATCTGATGAAGGTTGGCAAGAAGCCAATTCAAAAGGGAGGTCTGCAAATGCCGGTAACCGCAAGTTTGGACGCAAACAACGACCTCTTCTATCAAAGCTAAGCATTAACGGTTCTAATAGTTACAGGGAGGGCAGTTATAGGAATGACATTACTTCACAGCCAGAAAAAGGAGCTCAAAAAGTCATTGCTGACATGTTATCTCCATCTAGACAATCAAAAGCTCGAAACTTAACTTTGAATGGGGACTCCATTAATCATCCAACAAAAGCTCATTTGTATAAAATTCCCTCCACTCCAGCTTCTGTAAGTTCTTTGGCGTCAAAGTCTATATCTTACAAAGAAGTGGCCGTGGCACCGCCAGGTACAGTTTTAAAGCCGTTATTGGAAAAAGCTGAGGTAGAGAAGGTAAATGCTGAAAGTGAGATATGCAACAGTCCACCTGTGATGCCAATAAATGAAGGTTCCATAGTTGATACAGTTTCCCAGCAAAATGAAACAGAGGGAACTAGTGAAATTGAATCTCAACAAGAAAATTCTGCATCAGAACTTGAGAAGGTTTCCCTTGTGTCTGATCATGCAAAACCTACAGAAACAAATGGTAGTAAGCTTTCAGCTGCAGCCAAACCGTTCAATCCAGGAACATTGTCCATGTCACACCATTTAAATCCAGTTTCCATGACAGGCATATATGATGCAAATGTTAGTCAAGGCATACTTGTGGAGCCTGTGCTTCCCCCTGCTGCTGCTAGGGTCCCTTGTGGGCCTAGATCACCTCTATATTACAGAACCAACTATACCTTCCGCATGAAACATGGTTCTACAAAATCCCATACCCCTATAGGGGAAAGAAGAATCATGAATCCTCATGCACCTGAGTTTGTTCCCAAAAGTGCTTCTCAAATAGAAACCAGTGATGCCAATTCAAATGTTTCCAGTGAGCATAAGCTAGGTGAAAATTTTATCAAAGTCAAGGATAGTTCCCCAAAGAGCAGCATTTCAGAATCTGAGAAGTCAGAGATAGCAAGGCAGATATTGCTCAGTTTTCTAATGAAATCAGTTCATCAAAATATTGATTCTGTGGATGAATCTGAAGTTAGTGAAGGAAAGACTGAGAACTTGAAAAATTCTTCTGATGAAATAGCTAAAGACAGTGCTGTCATAAAAATCATGTATGGGAATGAAGAAAAGAATAAGACAGTTCCTCAATCCAGTGATAGTGAGGAGCAAGAAAAATTAGATGTAACCGAGAAAAAGAATGGAGATGGTGAAGGATTTGTAGTTGTCACAAACAGGAGAAAAAGCAGGCAGAAGATCAAAAATGGAGTCACAGAATTGTACAACCAGCAGTCCATCTGTGCTTCAGTTCGTTGA 5043 0.4123 MAPRPGKGKSNKAKAEKKKKEEKGVAPSLIDITVVTPYDSQLVLKGISTDKILDVRKLLAVKVETCHFTNYSLSHEVKGQRLNDKVEVVTLKPCLLRMVEEDYTEEAQAVAHVRRLLDIVACTTRFGKPKRGLPSPDSKPKKNGKAQNHSKTNLSPPATPNGLSEPPSSPISDNVGMVAIHPTPKLSDFYEFFSLSHLSPPILHLKRCELKDEDDRRKGDYFQLQVKICNGKVIEVVASEKGFYSVGKLSLQSYTLVDLLQQLSRGFANAYGSLMKAFLERNKFGNLPYGFRANTWLVPPSVAESPSNFPSLLAEDENWGGNGGGQGRNGEYDLKPWATDFAILASLPCKTEEERVMRDRKAFLLHSQFVDTSIFKAVAAIQHVMETKSNMKNGLNSSPGSILHEDHVGDLSIVVQRDIQGGTKKYDSILIESSIHKQDAKKNLIKGLTADESVIVNDTSSLALVVVHHCGYTATVRVVGNVNVRKTKVRDIEIDDLPDGGANSLNINSLRLLLHKSGAESSEGTLSPPSNLDDLDASKYLVRKVVQDCMEKIKEESIVSKRSIRWELGSCWVQHLQKQETSTDNSSKSKEDSNEVEHAVKGLGMQFKFLKKREKKPSNLDGADSKEKNDSRPGNVNLGADKVESNNNDSCSSNELEKILSEEAFLRLKESGTGLHIKSVDELINMAHKFYDEVALPKLATDFGSLELSPVDGRTLTDFMHLRGLQMRSLGEVVELAENLPHIQSLCIHEMITRAFKHLLKAIIASVDNVADLPSVVASALNFLLGGCRMEDTEQTLVDDHHLRTQWLRVFLSKRFGWTLNDEFQHLRKLSILRGLCHKVGLELVPRDYDLESPKPFGKYDIISLVPVCKHVGCSSIDGRNLLESSKIALDKGKLEDAVNYGTKALAKMMAVCGPYHRNTASAYSLLAVVLYHTGDFNQATIYQQKALDINERELGLDHPDTMKSYGDLSVFYYRLQHIELALKYVNRALFLLHFTCGLSHPNTAATYINVAMMEEGMGNVHVALRYLHEALKCNKRLLGADHIQTAASYHAIAIALSLMEAYSLSVQHEQTTLKILQSKLGSEDLRTQDAAAWLDYFESKAIEQQEAAKNGTPKPDTSIASKGHLSVSDLMDFISPDNDSKGNDAQRKHRRAKTLPISDNNRQEHDDAIADEGILFDNSNDATTMVQGNIEETNGTLDSEEVKENGDLTSYKLVTSEAVYDTSSDEGWQEANSKGRSANAGNRKFGRKQRPLLSKLSINGSNSYREGSYRNDITSQPEKGAQKVIADMLSPSRQSKARNLTLNGDSINHPTKAHLYKIPSTPASVSSLASKSISYKEVAVAPPGTVLKPLLEKAEVEKVNAESEICNSPPVMPINEGSIVDTVSQQNETEGTSEIESQQENSASELEKVSLVSDHAKPTETNGSKLSAAAKPFNPGTLSMSHHLNPVSMTGIYDANVSQGILVEPVLPPAAARVPCGPRSPLYYRTNYTFRMKHGSTKSHTPIGERRIMNPHAPEFVPKSASQIETSDANSNVSSEHKLGENFIKVKDSSPKSSISESEKSEIARQILLSFLMKSVHQNIDSVDESEVSEGKTENLKNSSDEIAKDSAVIKIMYGNEEKNKTVPQSSDSEEQEKLDVTEKKNGDGEGFVVVTNRRKSRQKIKNGVTELYNQQSICASVR* 1681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g02258 1680 MobiDBLite consensus disorder prediction 1385 1409 - -
Rops4g02258 1680 MobiDBLite consensus disorder prediction 1624 1644 - -
Rops4g02258 1680 MobiDBLite consensus disorder prediction 147 171 - -
Rops4g02258 1680 MobiDBLite consensus disorder prediction 640 654 - -
Rops4g02258 1680 MobiDBLite consensus disorder prediction 1225 1245 - -
Rops4g02258 1680 MobiDBLite consensus disorder prediction 1225 1240 - -
Rops4g02258 1680 SMART tpr_5 921 954 IPR019734 GO:0005515
Rops4g02258 1680 SMART tpr_5 1005 1038 IPR019734 GO:0005515
Rops4g02258 1680 SMART tpr_5 963 996 IPR019734 GO:0005515
Rops4g02258 1680 ProSiteProfiles TPR repeat profile. 921 954 IPR019734 GO:0005515
Rops4g02258 1680 Pfam Tetratricopeptide repeat 1004 1078 - -
Rops4g02258 1680 Pfam Tetratricopeptide repeat 920 990 - -
Rops4g02258 1680 SUPERFAMILY TPR-like 887 990 IPR011990 GO:0005515
Rops4g02258 1680 MobiDBLite consensus disorder prediction 128 176 - -
Rops4g02258 1680 Gene3D Tetratricopeptide repeat domain 880 1125 IPR011990 GO:0005515
Rops4g02258 1680 MobiDBLite consensus disorder prediction 577 596 - -
Rops4g02258 1680 MobiDBLite consensus disorder prediction 1385 1431 - -
Rops4g02258 1680 MobiDBLite consensus disorder prediction 613 654 - -
Rops4g02258 1680 Pfam Translation initiation factor eIF3 subunit 135 708 850 IPR033646 -
Rops4g02258 1680 ProSiteProfiles Clueless (Clu) domain profile. 315 587 IPR025697 -
Rops4g02258 1680 MobiDBLite consensus disorder prediction 1 22 - -
Rops4g02258 1680 FunFam Tetratricopeptide repeat (TPR)-like superfamily protein 876 1126 - -
Rops4g02258 1680 MobiDBLite consensus disorder prediction 1616 1653 - -
Rops4g02258 1680 SUPERFAMILY TPR-like 959 1076 IPR011990 GO:0005515
Rops4g02258 1680 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT EIF-3 9 1559 IPR027523 GO:0006996
Rops4g02258 1680 MobiDBLite consensus disorder prediction 613 631 - -
Rops4g02258 1680 Pfam Mitochondrial function, CLU-N-term 49 120 IPR028275 -
Rops4g02258 1680 CDD CLU-central 710 851 IPR033646 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g02258 Rops-Chr4 49280579 49292123 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g02258 K03255 - gmx:100784276 2625.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops4g02258 4 49280579 49292123 Rops4g02258 4 49280579 49292123 ECH