Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g02244 ATGCTTGGCTTGGGTGCGGACCTCTTGTGGGCCGACATGAACCGCCTCCTAGCTTTCCTCTTCCACCAGGGAGTGTTGGATGAGCAATTCTTGCAGCTTCAGCAGCTGCAAGATGAGACCTCCCCAAACTTTGTCTCCGAGGTTGTCAACATTTATTTCCATGAGTCTGAGAAGCTTCTTAGGAATCTCAGAGCATTGCTGATGGAGAGGGAGTTCTTGGACTATAAGAAAATGAGGTATCATTTGAATCAGTTTATGGGTAGCAGCTCCAGCATTGGCGCCAAGAGAGTCACTAACGTTTGCATTGCCTTTCGTGCAGCTACTGAGCAGAACAACCGTGCTGGATGCTTGCGAGCGTTGGAGATGCTGGAGCATGAATATTGCTATCTCAAGAACAAATTGCACGAACTCTTCCAAATTGAGCAGCAACGTGCTTTGGCAGCAGGAGTGAGGTACCCACCGGTGCAGAATTAA 474 0.4873 MLGLGADLLWADMNRLLAFLFHQGVLDEQFLQLQQLQDETSPNFVSEVVNIYFHESEKLLRNLRALLMEREFLDYKKMRYHLNQFMGSSSSIGAKRVTNVCIAFRAATEQNNRAGCLRALEMLEHEYCYLKNKLHELFQIEQQRALAAGVRYPPVQN* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g02244 157 FunFam Histidine-containing phosphotransfer protein 1 4 153 - -
Rops4g02244 157 SUPERFAMILY Histidine-containing phosphotransfer domain, HPT domain 9 143 IPR036641 GO:0000160
Rops4g02244 157 PANTHER PHOSPHORELAY INTERMEDIATE PROTEIN YPD1 11 143 IPR045871 GO:0000160|GO:0009927|GO:0043424
Rops4g02244 157 Gene3D HPT domain 4 156 IPR036641 GO:0000160
Rops4g02244 157 ProSiteProfiles Histidine-containing phosphotransfer (HPt) domain profile. 41 137 IPR008207 GO:0000160
Rops4g02244 157 Pfam Hpt domain 47 115 IPR008207 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g02244 Rops-Chr4 49171010 49172310 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g02244 K14490 - gmx:100789608 286.189
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops4g02244 4 49171010 49172310 Rops4g02244 4 49171010 49172310 ECH