Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g02243 ATGAAGGAGGAGTTCGTTGTGCAAGATGGGTATGTGTTCAAAGAAGAGACACACCTAACAGTGCTCAAAACCTCTCTTTTCTTCGCTGGTGATGGCTTTGCTGTGTACGATTGCAAGGGTCAACTCGTCTTCCGATTCGACTCATATGGACCCCACACTCGTGACAAGGATGAGCTTGTTCTCATGGATCCACATGGCCGTTCTCTTCTCACCCTGCGAAGAAAGAAACCGAGTCTTCATCAACGGTGGGAAGGATTCAAAGGGGAGAGAACGGACGGTGATAAACCGATGTTCAGCGTGAAGAGATCATCGATAATCGGACGGTCAAGGACGAGCGTGACGGTGGAGGTGTACGATAACCCAGGTGTGGAGTACCTTATCGAAGGGTGCTTCCCTCAACGGTGTTGCAAGGTTTTCAACTCCACGAAGAAATTAGTGGCCGAGATTCGTCGCAAAGTGGACCCCACCACCAGCGTCATGCTTGGGAAGGAAGTGTTCATGCTTTGCGTTCAGCCTGGTTTTGATGGGGCCTTTGCCATGGGATTGGTCTTGGTACTTGATCAGATCAACGGTGAGAGTTTCTTTGATAACGGAACCACGGAGCCTGCGGTGCACCCTGCTACAGAAGATTGA 633 0.5039 MKEEFVVQDGYVFKEETHLTVLKTSLFFAGDGFAVYDCKGQLVFRFDSYGPHTRDKDELVLMDPHGRSLLTLRRKKPSLHQRWEGFKGERTDGDKPMFSVKRSSIIGRSRTSVTVEVYDNPGVEYLIEGCFPQRCCKVFNSTKKLVAEIRRKVDPTTSVMLGKEVFMLCVQPGFDGAFAMGLVLVLDQINGESFFDNGTTEPAVHPATED* 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g02243 210 Gene3D - 4 193 IPR038595 -
Rops4g02243 210 Pfam LURP-one-related 5 185 IPR007612 -
Rops4g02243 210 SUPERFAMILY Tubby C-terminal domain-like 5 190 IPR025659 -
Rops4g02243 210 PANTHER - 17 190 IPR007612 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g02243 Rops-Chr4 49139347 49141169 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g02243 - - gmx:100783735 382.489
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops4g02243 4 49139347 49141169 Rops4g02243 4 49139347 49141169 ECH
Rops7g00129 7 1818330 1819608 Rops4g02243 4 49139347 49141169 PCT