Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g02241 ATGGAGAACGAACCACAAAGTGATGAGGTGTTATCAGTAGAGCTTTCAGCTCCCCCTGCTTGGAACAAACTGTACTTCCCTAAGAAAGTAGGAACACCAAGAAAAAATGAGATCATATTCATTGCTCCAACTGGGGAAGAGATCAGTTCCAGAAAACAATTGGAGCAGTACCTGAAAGCACATCCTGGGAATCCTGCTATATCAGAGTTTGACTGGGGAACTGGTGAGACCCCTAGGCGATCAGCAAGGATTAGTGAGAAGTTCAAATCAACTCCTCCACCAGATACCGAGCCTCCAAAGAAACGAACTCGAAAATCATCATCAGGTTCAAAGAAGGATAGCGAAGAACCTGAATCTGCTTCAGAGGAAGGCAAGGCAAAGTCTGCTGCTGAAGAAGAATCCAAGGCTGATCTAAATGACACTGATAACAATAACAATGATGAAACAAAGAGTGATACAGAGGAAATTAAGCATGGCAATGTGGAAGGTGAAAATGTGGCTGCTGAAAAGCCTCAAGGGGAAGAAGAAGAACCTTTATCAGCATCGGGGGAGAAATTTTCTAAGGAAGCTTTGAATGCTAAATCCCAAGGGGAGGCACCAGTTGAATCAGAAAAAGAAAATGGTGCAGTTGACAGTGAGCAGGATAAATCAGGTACTGTGAATCTTGAGTCAAATGAAGGAGCTGAGAAAGTGAATCCCAATGTTGAAGAGATGAATGCTGTGAAAGAAATCGCAATAAGTGACGGAACAAACACCATTCAAGCTGAGGAACAAGTCAAGGAAATGGTTGATAATGGAAATATTATTTGGAGCTGTGCTCAGTGA 825 0.4267 MENEPQSDEVLSVELSAPPAWNKLYFPKKVGTPRKNEIIFIAPTGEEISSRKQLEQYLKAHPGNPAISEFDWGTGETPRRSARISEKFKSTPPPDTEPPKKRTRKSSSGSKKDSEEPESASEEGKAKSAAEEESKADLNDTDNNNNDETKSDTEEIKHGNVEGENVAAEKPQGEEEEPLSASGEKFSKEALNAKSQGEAPVESEKENGAVDSEQDKSGTVNLESNEGAEKVNPNVEEMNAVKEIAISDGTNTIQAEEQVKEMVDNGNIIWSCAQ* 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g02241 274 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 7 77 IPR001739 GO:0003677
Rops4g02241 274 MobiDBLite consensus disorder prediction 93 183 - -
Rops4g02241 274 PANTHER METHYL-CPG BINDING DOMAIN CONTAINING PROTEIN, EXPRESSED 1 242 IPR039622 -
Rops4g02241 274 MobiDBLite consensus disorder prediction 57 236 - -
Rops4g02241 274 Gene3D - 9 82 - -
Rops4g02241 274 MobiDBLite consensus disorder prediction 213 228 - -
Rops4g02241 274 Pfam Methyl-CpG binding domain 15 76 IPR001739 GO:0003677
Rops4g02241 274 SUPERFAMILY DNA-binding domain 6 103 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g02241 Rops-Chr4 49115823 49118192 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g02241 - - vun:114166886 268.085
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops4g02241 4 49115823 49118192 Rops4g02241 4 49115823 49118192 ECH