Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g02232 ATGGTCGTTTTCTCTGTGAAACCCTTGTTCAGCATTCTCCTCGTCTCACTCTCTCTCATCCTCGTTTTGGCATTGCTATCGCTTCCTTCCCCTTTCTCCCAGAATCGAATTTCTGGGGAACCCTCACTAGGGGAAGTGGATATATGGAATGTTCGGAGACTCGTGGAATGGAGACCTTGCAATTGGTGGCTACGAGGGCATCAAACAGCTCTACCATTAGAAAATAATGGATATATCAGAGTGGATTGCTACGGGGGCCTCAATCAGATGCGAAGAGATTTCTGTGATGGTGTGGGCATTGCTCGTCTGTTAAATGCAACCCTGGTCCTGCCGAAGTTTGAAGTGGCTTCATATTGGAATGAAACAAGTGGTTTTGCTGATATATATGATGTAGACTACTTCATTCAACAAATGGATGGTTTTGTCAAAGTTGTCAAAGAGTTACCACCAGAGATTGCATCAAATGAACCTGTTCAAGTGGACTGTAGCAAACGGAAGGGCCAATTTGATTATGTTGAGAGCATTCTTCCATCTCTGTTAAAACACAAATACATTTCAATCACACCAGCAATGTCCCAAAGAAGGGACAGATACCCTTTGTATGCAAAAGCTGCTCTCTGTCAAGCTTGTTATAAGGCATTACGTCTCACCAGATCCTTGGAAATGAAAGCCTCTCAGCTTCTAGACGCAATACCTAAACCCTTTTTGTCTCTTCATCTTCGTTTTGAGCCTGATATGGTTGCATACAGCCAGTGTGAGTACCCAGGCCTTTCACCCGCTTCCATCAAAGCCATAGAAGCAGCACAAGTGGACAGAAAACCATGGACTGGAGAGTTAGCCCGCATTTGGAGACAACGTGGGAAATGTCCCCTTACACCTAATGAGACAGCTTTAATCCTTCAATCTCTTTCCATCTCGCCAACCGTGAATATATACCTGGCAGCTGGAGATGGTCTGATGGAAATTGAAGGTTTAACAGATACCTACACTAATATATTTACTAAGTCTAGCCTTCTCAGTGGGGAAGACTTCACGAGCATGCATGGCAATACAAAAGCTGCTTTGGATTATTATGTATCCATTAATAGTGATTCGTATGTAGCTACCTATTTTGGGAACATGGATAAGATGGTTGCAGCAATGAGAGCTTACAAAGGGTTGTATAAAACTCTATTTTTGAGCAGAAGAGGTTTTGCAGAATTAACCTCACAGGGTCTGAGCGGAAAAGAGTTGATGCAAGCTCTATGGAAGGTTCACAGAGATGATTTTGCAATGGGAAGAGGCTCTGCTCTTCCCGAGTGCTTTTGCGAATTGAAGTTGTGA 1323 0.4339 MVVFSVKPLFSILLVSLSLILVLALLSLPSPFSQNRISGEPSLGEVDIWNVRRLVEWRPCNWWLRGHQTALPLENNGYIRVDCYGGLNQMRRDFCDGVGIARLLNATLVLPKFEVASYWNETSGFADIYDVDYFIQQMDGFVKVVKELPPEIASNEPVQVDCSKRKGQFDYVESILPSLLKHKYISITPAMSQRRDRYPLYAKAALCQACYKALRLTRSLEMKASQLLDAIPKPFLSLHLRFEPDMVAYSQCEYPGLSPASIKAIEAAQVDRKPWTGELARIWRQRGKCPLTPNETALILQSLSISPTVNIYLAAGDGLMEIEGLTDTYTNIFTKSSLLSGEDFTSMHGNTKAALDYYVSINSDSYVATYFGNMDKMVAAMRAYKGLYKTLFLSRRGFAELTSQGLSGKELMQALWKVHRDDFAMGRGSALPECFCELKL* 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g02232 440 PIRSF UCP009360 3 438 IPR024709 -
Rops4g02232 440 PANTHER OS02G0726500 PROTEIN-RELATED 14 425 - -
Rops4g02232 440 CDD O-FucT_plant 78 390 IPR024709 -
Rops4g02232 440 Pfam GDP-fucose protein O-fucosyltransferase 78 384 IPR019378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g02232 Rops-Chr4 48975133 48978228 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g02232 72 410 Miscellaneous Gene Families AT1G22460 33.903 6.07e-56 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g02232 - - gmx:100801207 785.408
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops4g02232 4 48975133 48978228 Rops4g02232 4 48975133 48978228 ECH