Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g02221 ATGGCGTTGTTCTCTGCAACTGCAACCGTTCCTCGAAACCTCACCTTCTCTTCCTCTAACAAACTCTCTTTCTCTCTTTCACCTTCTTCTTCTTCTTCGTCGTCATTTCACTTCGTGTCGTTTCCCACTTCTCCATCAAAACTACACAATCGCCTAATCGCTTCTTATATCCCACGCGCCCACGCGCCTTCTTCTTCTCCCTCCTCTGCCTCCTCCGATTCTACCTTCCACGGCCTCTGCTACGTCGTTGGTGACAACATCGACACTGACCAGATCATCCCCGCCGAATACCTAACCCTCGTACCTTCCAAACCCGACGAGTACGAGAAGCTAGGCTCCTACGCCCTTATCGGACTCCCAGCTTCCTACGCCACCCGGTTCGTCGAGCCCGGCGAATCCAAAACCAAGTACACCGTCGTTATCGCCGGCGCCAACTTCGGATGTGGCTCCTCCCGTGAGCACGCTCCGGTGGCTCTCGGTGCATGTGGTGCCGCCGCCGTTGTGGCGGAGTCCTATGCGCGGATCTTCTTCCGGAATGCGGTGGCTACCGGCGAGGTTTACCCGCTGGAGTCGGAGTCGCGGCTCTGTGTGGAGTGCCGCACCGGCGATGTGGTTACGATTGAGCTTGGGGAGAGCCGTTTGATCAATCACACCACCGGTAAGGAGTATCGTTTGAAACCAATCGGCGATGCCGGTCCGGTCATTGAGGCTGGTGGCATCTTTGCCTATGCAAGGAAAACCGGCATGATTCCCTCTCGTTGA 762 0.563 MALFSATATVPRNLTFSSSNKLSFSLSPSSSSSSSFHFVSFPTSPSKLHNRLIASYIPRAHAPSSSPSSASSDSTFHGLCYVVGDNIDTDQIIPAEYLTLVPSKPDEYEKLGSYALIGLPASYATRFVEPGESKTKYTVVIAGANFGCGSSREHAPVALGACGAAAVVAESYARIFFRNAVATGEVYPLESESRLCVECRTGDVVTIELGESRLINHTTGKEYRLKPIGDAGPVIEAGGIFAYARKTGMIPSR* 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g02221 253 PANTHER 3-ISOPROPYLMALATE DEHYDRATASE SMALL SUBUNIT 2-RELATED-RELATED 74 251 - -
Rops4g02221 253 FunFam Isopropylmalate/citramalate isomerase small subunit 72 249 - -
Rops4g02221 253 Pfam Aconitase C-terminal domain 136 184 IPR000573 -
Rops4g02221 253 SUPERFAMILY LeuD/IlvD-like 76 250 - -
Rops4g02221 253 Gene3D Aconitase, domain 4 73 249 IPR015928 -
Rops4g02221 253 CDD IPMI_Swivel 82 209 IPR033940 -
Rops4g02221 253 NCBIfam 3-isopropylmalate dehydratase, small subunit 80 246 IPR011827 GO:0016836
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g02221 K01704 - gmx:100809737 351.673