Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g02218 ATGGGGAAGGACAACTTAAAGGAACATGTTCTTACGGCTTTCACTCATAATGGTGACTATATGGCTATTCTGTCTGCAAATGGGGTGGCCAAAATTTGGAACACAAACAGTGGATCATTGTTAGCAGAGTTGAAGCCATCAGATGGAGATCATGATATTCATTATTCTTGTATTGCATGTAATTTCACTGGAAAAAAGCATAGAAAAAAACAGGGAACGTGCTTATTAGCTCTTGGAACAGTTGATGGAAGCATTCTGGCTGTTGATGTTTCTACTGGTGAGAGAAAATGGACTTATAGCCATCCAAGTGGGGTTTGTGGACTTTCATTTGCAAATAAAGGACATCTTCTTCGTGTTGTTGGATATAAAGGGATGGCATCTGAGATTAATACTGAAACAGGAGAGCTTTTAAAGGAGTTTAGAATCTCAAAAAAGACCATCTCTTCTCTGGCTTTCTCACATGATGAAAAATATTTAGCTATTGTCAGCACTAAAGTACGGATTATAAGCTGGGAAAATGGAAAAGAGGTTCTGAAGTTCCCTAATGATCTGGAAAATGTACAGTATGTTTCTATATCCAGTGATGCCAAAGATTTAGTTACATCAGATTTTGAGGGTAAACATCTTCAAGTTTGGAGGTGTGATATAAATTCAGGAACTGTGAGTGTTGGTCCTACACTTCCCATAAGGCATCGTCCATTAGTTCTTGAATGCCACCATGGTTGCAATAAAGAAGATGATTTAGTTGTCTTGGCAGTTACGGGTTCAGGTGCAGCTTATATATGGAATTTGAATGCCTCCTCTGAAGATCAGATACAGCCAACTAAGCTTACTGCAAAGACAAAAAAAGTTGAAACTGATAAGGAGAACAGTGAAAGTTCAAAGAAAAGGCGTGCTTCAATTATTGCATCCAGATTACAACCCATAGGGGAAGACAAACAGATGAAAGGTCTTGTGACTTATGGCTCTGTAAATCATCCACAGTTTACTCTCTTAGATATTAGTGATGCTGTGGAGAATATAGTATTAAATGTGGGAGATGAGGCTGATTCTGTTCAGAAGCACGACAGTCCTTCTACGAAAGAAGTCCCAATGGAAAGCAAGAAGGCCAGGAAAAGACAAGCGACATCTGATCCTGATGATCTTTCAACCACAATTGACAAGGTGGATTTCGATCAATGTGAGGCTGCAGAAGGAGTCCTTCTTGATGATGATTTGAGTGAGCCAACGATGGGAGAGAAACTTGCTAGTCTCAGTTTGCTGGACGAGAACAAATCCAGAAGTGACAAAGAGCAAGAACATTCTATCTCAGCAAAGCCTCCGAGTGCAGACTCTGTACATGTTTTGCTTAAGCAAGCATTAAATGCTGAAGATCGCACCCTTCTTCTAGATTGCTTGTATACACAAGACGAGAAGGTTATTAAAAAGTCAATTGCAGAATTGAACCCATCCAACGTCCTCAAGCTTCTACACTCTCTCATATCCATTATTGAATCCAGGGGTGCAATCTTGGCATGTGCTCTTCCATGGCTGAAGTGTCTACTTCTACAGCATGCAAGTGGAATAATGTCCCAGGAATCTTCATTAAAAGTTTTGAACTCTCTGTATCAACTAATTGAGTCTAGAGTCTCCACTTTTAAATCTGCCCTCCAACTGTCGAGTTGCTTAGACATCCTTTACACAGGGGTTATTGAGGAGGAGGTGGATGAAGTTGAAAATGTGCCAGTTATCTATGAGGACACGGATGATAGTGAAGAAGAATCTGAGGATGTCATGGAAACTGACCAAGATAACAAAGATGGAGAAGGATCAGATGAAGAAGCATTTGATGGTGTTAGTGACATTGAAGGAAGTGATGATATGATGGGAGATTGA 1875 0.4005 MGKDNLKEHVLTAFTHNGDYMAILSANGVAKIWNTNSGSLLAELKPSDGDHDIHYSCIACNFTGKKHRKKQGTCLLALGTVDGSILAVDVSTGERKWTYSHPSGVCGLSFANKGHLLRVVGYKGMASEINTETGELLKEFRISKKTISSLAFSHDEKYLAIVSTKVRIISWENGKEVLKFPNDLENVQYVSISSDAKDLVTSDFEGKHLQVWRCDINSGTVSVGPTLPIRHRPLVLECHHGCNKEDDLVVLAVTGSGAAYIWNLNASSEDQIQPTKLTAKTKKVETDKENSESSKKRRASIIASRLQPIGEDKQMKGLVTYGSVNHPQFTLLDISDAVENIVLNVGDEADSVQKHDSPSTKEVPMESKKARKRQATSDPDDLSTTIDKVDFDQCEAAEGVLLDDDLSEPTMGEKLASLSLLDENKSRSDKEQEHSISAKPPSADSVHVLLKQALNAEDRTLLLDCLYTQDEKVIKKSIAELNPSNVLKLLHSLISIIESRGAILACALPWLKCLLLQHASGIMSQESSLKVLNSLYQLIESRVSTFKSALQLSSCLDILYTGVIEEEVDEVENVPVIYEDTDDSEEESEDVMETDQDNKDGEGSDEEAFDGVSDIEGSDDMMGD* 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g02218 624 MobiDBLite consensus disorder prediction 418 441 - -
Rops4g02218 624 MobiDBLite consensus disorder prediction 423 437 - -
Rops4g02218 624 MobiDBLite consensus disorder prediction 273 299 - -
Rops4g02218 624 Pfam Dip2/Utp12 Family 458 559 IPR007148 -
Rops4g02218 624 Gene3D - 11 301 IPR015943 GO:0005515
Rops4g02218 624 SMART WD40_4 173 213 IPR001680 GO:0005515
Rops4g02218 624 SMART WD40_4 4 34 IPR001680 GO:0005515
Rops4g02218 624 SMART WD40_4 133 170 IPR001680 GO:0005515
Rops4g02218 624 SMART WD40_4 92 130 IPR001680 GO:0005515
Rops4g02218 624 MobiDBLite consensus disorder prediction 578 624 - -
Rops4g02218 624 SUPERFAMILY WD40 repeat-like 13 268 IPR036322 GO:0005515
Rops4g02218 624 MobiDBLite consensus disorder prediction 280 299 - -
Rops4g02218 624 MobiDBLite consensus disorder prediction 578 614 - -
Rops4g02218 624 Pfam PQQ enzyme repeat 78 99 IPR002372 -
Rops4g02218 624 PANTHER OS03G0300300 PROTEIN 5 606 - -
Rops4g02218 624 MobiDBLite consensus disorder prediction 349 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g02218 Rops-Chr4 48870176 48876096 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g02218 K14546 - gmx:100792757 932.939
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops4g02218 4 48870176 48876096 Rops4g02218 4 48870176 48876096 ECH