Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g02209 ATGGAGGCTGTTCTTCAAACACGAGGGCTTCTCTCTCTCCCCACAAACCCCAGAGACAGGGTTTTGAACCCATCACAGGGCTTAAAGCATAGATTTTTCTCACTAAAGCCCAAAACCCTTGGTGGGTCTTCTCTAACTACCAATGGATTCCAAAGACTCCATGGTGGTGTTGTGGCATCAAAAGCCAATGTCTTTGGTCAAAAGGACAAAAATTTATTCATTTGCAAGGCTGAAGCTGCTGCTTCTGCTGATGGGCAACCAGTGTTTGGTGAAATTGAGGCTGAGAAGCCAAAGTTTTTGGGTATTGAGATTGCCACCCTGAAAAAGATTGTACCTTTGGGGATGATGTTCTTTTGCATCCTATTTAACTATACTATTCTCAGAGACACCAAGGATGTTTTGGTTGTAACAGCAAAAGGAAGCAGTGCTGAGATTATACCATTTCTCAAAACATGGGTGAACCTTCCCATGGCTGTTGGGTTCATGTTGTTGTACACAAAATTGGCTAATGTTTTGTCCAAGCAAGCTCTCTTCTACACTGTTATTCTTCCTTTTATTGCATTCTTTGGGGCGTTTGGGTTTGTTTTGTACCCTCTCAGCAACTATATTCATCCTGAGGCATTTGCAGATAAGCTTCTCAACGTCCTTGGCCCCAGGTTCCTTGGTCCACTTGCAATTATGAGAATATGGAGCTTCTGTTTGTTCTATGTCATGGCTGAATTGTGGGGGAGTGTGGTCATTTCTGTGTTGTTTTGGGGATTTGCTAATCAGATAACTACTGTTGATGAAGCAAAACGATTCTATCCACTGTTTGGACTTGGGGCCAATGTGGCCCTTATATTCTCTGGCCGGACAGTGAAATACTTCTCTAATCTGAGGAAGAATTTAGGTCCTGGAGTTGATGGTTGGGCCATTTCTCTAAAAGCAATGATGAGCATAGTTGTGCTTATGGGGCTTGCAATCTGTTTCCTGTACTGGTGGGCGAATAGTTATGTTCCTCTTCCTACACGAAGCAAGAAGAAGAAGGAGAAGCCCAAAATGGGAACAATGGAGAGCTTGAAGTTCTTGGTGTCTTCAAGGTACATCAGAGATCTTGCCACTTTGGTGGTTGCTTATGGAATTAGCATTAATCTTGTTGAGGTTACATGGAAATCCAAGCTCAAAGCTCAGTTCCCTAGCCCTAATGAGTACTCTTCTTTCATGGGTGACTTCTCAACTGCAACTGGAATTGCCACATTCACAATGATGCTTCTAAGCCAATTTATATTTGACAAATATGGATGGGGAGTTGCTGCCAAGATCACACCTACAGTCCTGCTTTTGACAGGAGTTGGTTTCTTTTCTCTTATATTGTTTGGAGGCCCACTTGCTCCTGGTCTTGCAAAGTTTGGAATGACTCCACTACTGGCAGCTGTATATGTGGGTGCCATGCAGAACATATTCAGCAAGAGTGCTAAGTACAGTTTATTTGATCCCTGCAAAGAAATGGCCTACATACCCTTGGATGAGGATACCAAGGTTAAAGGGAAGGCAGCTATTGACGTTGTGTGCAATCCATTAGGGAAATCTGGAGGTGCCCTTATTCAGCAATTCATGATCTTAACATTTGGATCACTAGCTAATTCAACCCCATACCTTGGAGGGGTACTTCTGGTGATTGTTCTTGCATGGCTGTCAGCAGCCAAGTCCTTGGATACCCAATTCACCGCGTTGCGTCAGGAGGAAGAACTCGAGAAAGAGATGGAAAGAGCAGCTGCTGTTAAGATACCAGTGGTGGCTGAGAATGCTGGAGGAAATGGTTCTCTTGCTGGTGGTTCTTCACCATTAAATCAAGCACCAGGTGACTCCTCAAGTAGTAGTCCATCTGAAGAAGCCTCAACTTCTCGCAATAGTTAA 1896 0.4378 MEAVLQTRGLLSLPTNPRDRVLNPSQGLKHRFFSLKPKTLGGSSLTTNGFQRLHGGVVASKANVFGQKDKNLFICKAEAAASADGQPVFGEIEAEKPKFLGIEIATLKKIVPLGMMFFCILFNYTILRDTKDVLVVTAKGSSAEIIPFLKTWVNLPMAVGFMLLYTKLANVLSKQALFYTVILPFIAFFGAFGFVLYPLSNYIHPEAFADKLLNVLGPRFLGPLAIMRIWSFCLFYVMAELWGSVVISVLFWGFANQITTVDEAKRFYPLFGLGANVALIFSGRTVKYFSNLRKNLGPGVDGWAISLKAMMSIVVLMGLAICFLYWWANSYVPLPTRSKKKKEKPKMGTMESLKFLVSSRYIRDLATLVVAYGISINLVEVTWKSKLKAQFPSPNEYSSFMGDFSTATGIATFTMMLLSQFIFDKYGWGVAAKITPTVLLLTGVGFFSLILFGGPLAPGLAKFGMTPLLAAVYVGAMQNIFSKSAKYSLFDPCKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALIQQFMILTFGSLANSTPYLGGVLLVIVLAWLSAAKSLDTQFTALRQEEELEKEMERAAAVKIPVVAENAGGNGSLAGGSSPLNQAPGDSSSSSPSEEASTSRNS* 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g02209 631 MobiDBLite consensus disorder prediction 600 631 - -
Rops4g02209 631 Pfam TLC ATP/ADP transporter 96 568 IPR004667 GO:0005471|GO:0006862|GO:0016020
Rops4g02209 631 PANTHER - 1 624 IPR004667 GO:0005471|GO:0006862|GO:0016020
Rops4g02209 631 NCBIfam NTP/NDP exchange transporter 102 568 IPR004667 GO:0005471|GO:0006862|GO:0016020
Rops4g02209 631 MobiDBLite consensus disorder prediction 598 631 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g02209 Rops-Chr4 48790333 48794555 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g02209 1 602 Organic Solute Cotransporters AT1G80300 81.169 0.0 966
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g02209 K03301 - jre:108993173 1068.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops4g02209 4 48790333 48794555 Rops4g02209 4 48790333 48794555 ECH
Rops7g00165 7 2339009 2342698 Rops4g02209 4 48790333 48794555 PCT