Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g02193 ATGGAGATGTCTCGAAGCTTGTTACCAGAGAAGAAATTTCCAAAGAAATTCTGGGTTGAGGTTGTAAACGCAGCAGTTCACATTCTAAATAAGCTTCCTACCAAAGCTCTTGATGAAAATACACTAATTGAGGTATGGTCAGGTCACAAGCCTTCAGTTAAACACTTGAAAGTGTTTGGCTCCTTGAGCTACACTCATATTCCTGCTGCAAAAAGAGGAAAATTAGATGACAAAGCTAATGTTGGTGTCTTCCTTGGTTATGCTTCTCAATCAAAAGCATCCAAATTTAAGGTTTGGAATGCTGCAATGCAGGAGGATATTAACATAATAGAGAAAAACAACACCTGGAGTCTCATTGACAGACCAAATGATAGAAATGTGATTGGTGTGAAGTGGGTGTTTAGAGTAAAATTGAAACATGATGGTAGCATCAACAAGCATAAAGCTAGATTAGTTGTGAAAGGCTATGCACAGCAACCAGGAGTTGATTTTGGAGATACATTTGCTCCCGTGGCCAGACTTGATACTATGATTTTGGAGAGCTTGGGAGTTGAAAAGTACTTGGATGAACACCTGAACTCAACCAATTACCTTATCCGGGTTATGAAATACAAAGGTCCTCAAACCAGTGACACAAAGCCAGGCCTCAGCGCGCACACAGACAAGAACATCATGACCATATTGTACCAAAATCAAGTAAAGGGTTTAGAGGTGCTGACCAAAGATGGAAAATGGATAAGCTATAAGCCTTCCCCAAACAGCTTCCTTGTTCTGATTGGTGATTCTCTCCATGCATGGTCAAACGGCAGGCTGCATTCGCCGCTTCACCGAGTGATGTTGAGCGGGAATGAGGCAAGATACTCCACAGGGCTGTTCTCTGCCTTCAAAGAAGGTTGCATTATAAAAGCCCCAGAGGAATTAGTGGATGAGGAACACCCTCTGCTCTATAAGCCTTATGATCATGCTGAGTTCCTCAAGTACTGTAACACTAAAAATAGCCAGAGAGATCAGTTTCCTCTGCGCACTTACTGTGGTGTTTGA 1041 0.4207 MEMSRSLLPEKKFPKKFWVEVVNAAVHILNKLPTKALDENTLIEVWSGHKPSVKHLKVFGSLSYTHIPAAKRGKLDDKANVGVFLGYASQSKASKFKVWNAAMQEDINIIEKNNTWSLIDRPNDRNVIGVKWVFRVKLKHDGSINKHKARLVVKGYAQQPGVDFGDTFAPVARLDTMILESLGVEKYLDEHLNSTNYLIRVMKYKGPQTSDTKPGLSAHTDKNIMTILYQNQVKGLEVLTKDGKWISYKPSPNSFLVLIGDSLHAWSNGRLHSPLHRVMLSGNEARYSTGLFSAFKEGCIIKAPEELVDEEHPLLYKPYDHAEFLKYCNTKNSQRDQFPLRTYCGV* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g02193 346 PRINTS Isopenicillin N synthase signature 219 240 - -
Rops4g02193 346 PRINTS Isopenicillin N synthase signature 255 281 - -
Rops4g02193 346 Pfam 2OG-Fe(II) oxygenase superfamily 197 291 IPR044861 -
Rops4g02193 346 PANTHER GAG-POL-RELATED RETROTRANSPOSON 1 177 - -
Rops4g02193 346 Pfam Reverse transcriptase (RNA-dependent DNA polymerase) 113 179 IPR013103 -
Rops4g02193 346 Gene3D - 165 327 IPR027443 -
Rops4g02193 346 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 194 298 IPR005123 -
Rops4g02193 346 SUPERFAMILY Clavaminate synthase-like 173 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g02193 Rops-Chr4 48400886 48405960 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g02193 88 199 Receptor kinase-like Gene Family AT4G23160 36.842 6.64e-22 95.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g02193 - - gmx:100784444 296.204
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops4g02193 4 48400886 48405960 Rops4g02193 4 48400886 48405960 ECH