Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g02191 ATGGTTTTGGAGAGCTTGGGTGTTGAAAAGTACTTGGATGAGCACATGAACTCAACCAATTATGTTCTCCGGGTTATGAAATACAAAGGCCCTCAAACCAATGACACAAAGCTAGGCCTCGCCACACACACAGACAAGGGCATTGTGACCATATTGTACCAAAATGAAGTGAATGGTTTAGAGGTGCTGAACAAAGATGGAAAATGGATAAGCTACGAGCCTTCCCCTGACAGCTTCGTTGTTATGATTGGTGATGCTTTCCATGCATGGTCAAACGGCAGGCTGCATTCGCCGTTTCACCGAGTGATGATGAGTGGGAATGAGGCAAGATACTCTTTAGGTCTGTTCTCTGCCCCCATAGGAGGGTGCATTATAAAAGCCCCAGAGGAGCTGGTGGACGAGGAACACCCTTTGCTCTATAAGCCTTTTGATCTTCTTGAGTTCCTCAAGTATTACTACACTGAAAAAGGCCAGAGAGATCTGTTTGCATTCCGCACTTTCTGTGGTGTTTGA 513 0.4581 MVLESLGVEKYLDEHMNSTNYVLRVMKYKGPQTNDTKLGLATHTDKGIVTILYQNEVNGLEVLNKDGKWISYEPSPDSFVVMIGDAFHAWSNGRLHSPFHRVMMSGNEARYSLGLFSAPIGGCIIKAPEELVDEEHPLLYKPFDLLEFLKYYYTEKGQRDLFAFRTFCGV* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g02191 170 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 1 150 - -
Rops4g02191 170 Pfam 2OG-Fe(II) oxygenase superfamily 15 117 IPR044861 -
Rops4g02191 170 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 18 119 IPR005123 -
Rops4g02191 170 SUPERFAMILY Clavaminate synthase-like 2 157 - -
Rops4g02191 170 Gene3D - 1 151 IPR027443 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g02191 Rops-Chr4 48377866 48378771 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g02191 1 165 Glycosyltransferase AT5G59530 29.240 5.12e-17 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g02191 - - gmx:100784444 310.071
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops4g02191 4 48377866 48378771 Rops4g02191 4 48377866 48378771 ECH