Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g02181 ATGTCAGGAAGCAGTTTTAAATCTATGTTATCAACAACTCCACAACATTCTCCTTCATTTCGACGACTACATTCTAGCTTTACACCAAGAAGAGAAAGCAGGGGTGGTGCACAATTGTTAGGGAAGAAGCGGTTACTGTTATGGCTGCTTCTGATTACTCTTTGGTCTTATCTTGGATTTTTCGTTCAGTCCAAGTGGGCTCATGGTGATAAAGAGAATGAGTTTTCAGGCTTTGGAAGCAGGCAGACTGATACAAACTCGGATTTTGAACAGAATCAGCATCAAGATTTCATTGCCACAAACAAGTCCTTATCTGTTAGTAATGAAACAATTGGAATAGGTGACATAATGGATGTGGCTTTGGCAAAGAAAGAAAATGGTGTTCCATTTCAACGTATTAGCTCAAAGAAGAGGCGCAGAAGGTCAAGGAATACTTTGAGAGGTAAGAAGAAACGAAAACGCAAAGTTGAGATCAGTGGTATAGAGGAGCTGGAGCCAGAAATTCCTCAAAGAAATGATACCTATGGATTCCTTGTTGGTCCATTTGGTTCAATAGAGAATAGAATTCTTCAATGGAATTCTGAAAAGGGTTCTGCAAACTGTAACAAGAAGGGGGACTTTGCAAGCCTTGTTTGGTCCAAGAGGTTTATCTTGATATTTCATGAGCTTTCTATGACTGGAGCTCCACTTTCAATGATGGAGTTGGCTACTGAACTCTTGAGTTGTGGGGCCACTGTTTCAGCTGTTGTGCTTAGCAAGAAAGGTGGTTTGATGCAGGAGCTTGCCAGGAGACATATCAAGGTGCTCGAAGACAAAGCAGATCGCAGCATCAAAATTGCAATGAAGGCAGATCTTGTCATTGCTGGATCAGCTGTGTGTGCTTCCTGGATTGAACAGTATATTGAACATTTTCCTGCTGGTGCAAATCAAGTTGCTTGGTGGATTATGGAAAACCGACGAGAGTACTTTGATCGTTCAAAGGAGGTCTTGGGCAAAGTGAAGATGTTGGTTTTTCTTGCTGAATCACAATCTAAGCAATGGCAAAAATGGTGTGAAGAAGAAAGCATAAAACTGAGATCCCAGCCTGCATTTGTTCCATTGTCTGTTAATGATGAACTGGCTTTTGTAGCTGGCATTACTTCTACAATCAATAATCCATCCTTTAAAGCTGAGAAAATGGATGAGAAGAGGAAGTCATTGCGAGATTCAGTCAGAAGAGAAATGGGCTTGAGTGATAATGATATGCTAGTGATATCTCTTAGTAGCATCAACCGTGCGAAGGGTCAGCTATTGCTTCTTGAATCAGCAAGCTCAATAATAGAACATGGCACATTGCAAAATAATAAGAAAATGCAGAAGTCATCAGTTGTTGGAGAATACCCATCTATCCTGGCTATAAAACATCATATTAGAGAAACAGGTTGGGTAACTCTGAACAACATCTCAAGCAATTCTTTAAACAGAAGAAGGAAAGCATTGTCCCACAACAATGGAACAATGGCACACTCTCTCAAAATTCTCATTGGTTCTGTGGGATCTAAGAGTAACAAGGTGGATTATGTTAAAGGGCTTCTAAGTTTCTTAGCAAAGCATTCAAACTTGTCAAGGTCAGTTTTGTGGACTCCAGCCACCACACGTGTTGCCTCACTTTACTCTGCTGCAGATGTTTATGTCATAAACTCTCAGGGATTGGGAGAAACGTTTGGACGGGTGACTATAGAAGCCATGGCATTTGGTCTTCCGGTGCTGGGAACAAATGCTGGGGGAACACAAGAAATTGTGGAGCATAATGTGACAGGTCTTCTTCATCCTGTTGGACGTTCAGGGAATCATGTCCTTGCACAAAATATTCGGTTTTTACTTGAAAACAGATTGGCAAGAAAGCAAATGGGAATGGAAGGAAGAAAGAAGGTGCAGAGGATGTACTTGAAGCAGCACATGTATAAGAAATTTATAGAGGTTCTTGTCAGGTGCATGAAAAGCAAATAA 1989 0.4093 MSGSSFKSMLSTTPQHSPSFRRLHSSFTPRRESRGGAQLLGKKRLLLWLLLITLWSYLGFFVQSKWAHGDKENEFSGFGSRQTDTNSDFEQNQHQDFIATNKSLSVSNETIGIGDIMDVALAKKENGVPFQRISSKKRRRRSRNTLRGKKKRKRKVEISGIEELEPEIPQRNDTYGFLVGPFGSIENRILQWNSEKGSANCNKKGDFASLVWSKRFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKKGGLMQELARRHIKVLEDKADRSIKIAMKADLVIAGSAVCASWIEQYIEHFPAGANQVAWWIMENRREYFDRSKEVLGKVKMLVFLAESQSKQWQKWCEEESIKLRSQPAFVPLSVNDELAFVAGITSTINNPSFKAEKMDEKRKSLRDSVRREMGLSDNDMLVISLSSINRAKGQLLLLESASSIIEHGTLQNNKKMQKSSVVGEYPSILAIKHHIRETGWVTLNNISSNSLNRRRKALSHNNGTMAHSLKILIGSVGSKSNKVDYVKGLLSFLAKHSNLSRSVLWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGLPVLGTNAGGTQEIVEHNVTGLLHPVGRSGNHVLAQNIRFLLENRLARKQMGMEGRKKVQRMYLKQHMYKKFIEVLVRCMKSK* 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g02181 662 CDD GT4_PimA-like 217 655 - -
Rops4g02181 662 Gene3D Glycogen Phosphorylase B; 387 642 - -
Rops4g02181 662 MobiDBLite consensus disorder prediction 132 153 - -
Rops4g02181 662 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 525 657 - -
Rops4g02181 662 PANTHER BNAA05G14870D PROTEIN 4 662 - -
Rops4g02181 662 MobiDBLite consensus disorder prediction 1 34 - -
Rops4g02181 662 MobiDBLite consensus disorder prediction 133 153 - -
Rops4g02181 662 MobiDBLite consensus disorder prediction 1 24 - -
Rops4g02181 662 Pfam Glycosyl transferases group 1 525 636 IPR001296 GO:0016757
Rops4g02181 662 Pfam Glycosyl-transferase family 4 212 380 IPR041693 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g02181 Rops-Chr4 48235886 48239602 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g02181 5 660 Glycosyltransferase AT3G15940 57.895 0.0 746
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g02181 - - gmx:100796443 926.391
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops4g02181 4 48235886 48239602 Rops4g02181 4 48235886 48239602 ECH