Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g02180 ATGGCTAGCACGGTTGAAGAAGATGTTGAGTATGAGAGTGATCCTGAAGAGGCAAACCTATCACTGACAATGCGGAGGCGTGAGGCTAGTGATGATGAAGAAGGAGAAGGAGAAGGCATAGATAAGAGGGAAGATCCTCGTGTAAGGGTTCATTCTGATGATTCAGATGGTGAGGGAGGTGTTGCAGACTATGATGATGACGAAGAAGAGGAAGAATTGGAAGAAGAAGAGGAAGAGGTGGATGAGGAAGTTGAAGAAGAGGTTTATGAGGAGAAGGGTGCAACTGGGGTTGTTGAGGGTTCAGTGGATATGGCAAAGGAATCTGATGGTGATGTTAAACCCCCTGTGGAAGATTCTGGTGAGGTCCATTTAGAGGAGAAAAAGAAGAATGAACCATTTGCTGTGCCCACAGCTGGACCCTTTTATATGCATGATGACCGTTTCAGGGACAATGCTGGTGCCCGCAACAGGCGGATACATGGTGGAAGGAGACTGTGGGAGTCCAAAGATGACAGGAAATGGGGACATGATAAATTTGAGGAAATTACTTTGCAGGAAAGGCATTATGATGAGAGGAGGAGAACTTCTAAGGGTAATTATCGAGGCCGTGCTAAAAATCGAGGCAGTGATCGTGGAGGACATGCTCGAGGATACAGGAAAGGATATAATGACAGTAGCAATCAAAATCAGGTGCCTAAGGGTGTTGTGAAAGGAAGAGGACCCCGAAGGTATGAACCTACTTTTAGAAGCAATGGTTCAGCTGCTCCCCGAGGGCAAAATAAACAATCTGGGAAGTCTCTGGAGAAAAAAACTTCACAGGTTATTTCGGATAGAACTCCCACACCCGCTTCCAATGCAGAATCTGACCCTGTGCCTGTTAGAAGACAAGTGTTTGCTTCAAATTTGAATATTGCATCACCGCCATTTTATCCATCAGGCTCTTCCAGTAAAGAGATTAATATGGTGCAAAAAAGGGATGTACAAAATGGCAGCTCTAGCAAGAACATTCACCCTGTTGTCATGGATGAGGGTTTTCCTGTTCAACAAAACAATGCATTACTTCGGGGAAAGAATGTTGTTGATTCCATCGGCGTGGACAAACTTTATATTGATGAATCCATTAGTCCATCTGTTGGAAAACCTTCGAACAATGTGCATATGGCACCACCTGGATCTTCTGGATTCAGTGCTTCTCAATCTCATCTTCCCAGGGCTGCTGGGACTGGGAGGGGTGTGGCAATCCCAGTACAGATGAATTATCATCCTGCTTCCTCACCTAATCAAGTAAATAAAGCTTCTGCAATGCAACACCAGGCTATTCGGAGAACTGCTGCACCAGGGCGGGCTTCAACTTCTGTGAAAGCTACAGCCCCACAGTTTGGCCATCGACCTGGTAGTGGATCTCAATCCTCATCTCCCCCCAAAACAACTGCATCAATTAATTCACTTGATTCTGGAGAAGTGGATGCTGCATCAGAATCAGGTAAAGCCAAAGGAGCATTGGTTGGGAAGGGGAGGGGAGGATCCCAGGGTAGTGGAAGAGGATCTTTTGTTTATGGTGGGGCACAGGTAATGGGGGCTGCTGGAAATGTGAGTGTTAGTCATGGAGATCCGAACTTCCCAGCCACTCCTGCCTTCTTGCCAGTCATGCAATTTGGGGGACAGCATCCTGGTGGTATGGGAGTTCCTGCTGTTGGTATGGCATTCCCTGGATATGTTGCCCAGCCTCAACATGGTTTGGGAAACTCTGAAATGACATGGCTGCCCGTCTTGGCTGGTGCTGCAGGAGCTTTGGGGGCTACATACTGTCCACCTTACCTTGCCGTTGATGGTGCTTACTCTCGACAATCAGGACAGACCTCTGCAAGCAAGGAACATAAAGCTAATAGTGAATTGAAGCCACCACAGAAATCTGAGCCTGTGAGTGATGAGCATGGACAAAGGCAAAATAAACCCCGAAGATATTCAGAGATGAATTTTGGTCAGTGA 1989 0.4676 MASTVEEDVEYESDPEEANLSLTMRRREASDDEEGEGEGIDKREDPRVRVHSDDSDGEGGVADYDDDEEEEELEEEEEEVDEEVEEEVYEEKGATGVVEGSVDMAKESDGDVKPPVEDSGEVHLEEKKKNEPFAVPTAGPFYMHDDRFRDNAGARNRRIHGGRRLWESKDDRKWGHDKFEEITLQERHYDERRRTSKGNYRGRAKNRGSDRGGHARGYRKGYNDSSNQNQVPKGVVKGRGPRRYEPTFRSNGSAAPRGQNKQSGKSLEKKTSQVISDRTPTPASNAESDPVPVRRQVFASNLNIASPPFYPSGSSSKEINMVQKRDVQNGSSSKNIHPVVMDEGFPVQQNNALLRGKNVVDSIGVDKLYIDESISPSVGKPSNNVHMAPPGSSGFSASQSHLPRAAGTGRGVAIPVQMNYHPASSPNQVNKASAMQHQAIRRTAAPGRASTSVKATAPQFGHRPGSGSQSSSPPKTTASINSLDSGEVDAASESGKAKGALVGKGRGGSQGSGRGSFVYGGAQVMGAAGNVSVSHGDPNFPATPAFLPVMQFGGQHPGGMGVPAVGMAFPGYVAQPQHGLGNSEMTWLPVLAGAAGALGATYCPPYLAVDGAYSRQSGQTSASKEHKANSELKPPQKSEPVSDEHGQRQNKPRRYSEMNFGQ* 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g02180 662 MobiDBLite consensus disorder prediction 419 514 - -
Rops4g02180 662 MobiDBLite consensus disorder prediction 40 58 - -
Rops4g02180 662 MobiDBLite consensus disorder prediction 1 15 - -
Rops4g02180 662 SMART Btz_2 95 206 IPR018545 GO:0003729|GO:0006397|GO:0035145
Rops4g02180 662 MobiDBLite consensus disorder prediction 104 132 - -
Rops4g02180 662 MobiDBLite consensus disorder prediction 59 89 - -
Rops4g02180 662 MobiDBLite consensus disorder prediction 420 437 - -
Rops4g02180 662 PANTHER PROTEIN MLN51 HOMOLOG 1 662 IPR044796 GO:0003729|GO:0006397|GO:0035145
Rops4g02180 662 MobiDBLite consensus disorder prediction 449 488 - -
Rops4g02180 662 Coils Coil 66 90 - -
Rops4g02180 662 MobiDBLite consensus disorder prediction 143 218 - -
Rops4g02180 662 MobiDBLite consensus disorder prediction 19 33 - -
Rops4g02180 662 MobiDBLite consensus disorder prediction 614 662 - -
Rops4g02180 662 MobiDBLite consensus disorder prediction 1 292 - -
Rops4g02180 662 MobiDBLite consensus disorder prediction 626 652 - -
Rops4g02180 662 MobiDBLite consensus disorder prediction 252 286 - -
Rops4g02180 662 Pfam CASC3/Barentsz eIF4AIII binding 116 205 IPR018545 GO:0003729|GO:0006397|GO:0035145
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g02180 Rops-Chr4 48229449 48234866 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g02180 - - mtr:25491383 822.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops4g02180 4 48229449 48234866 Rops4g02180 4 48229449 48234866 ECH