Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g02170 ATGTTCTATGGTGCGGTGGTATGGGACCCTTGGCTTATTGTTGCTCAAATTGTTTGTCTTCAATGCTTGTACTATATCACCCTGGGATTGTTGTTATCGATACTTGTTGGCACTCGTGTATCTCGGATGAGCCTTGTGTATTTCTTTGATTATGTTACCATCACCACCTCTACCGTTACTGGTTGGTGTGTTATTGCTTCATTTCTGCTCAGCTCAGTTGCAGGGGCTGTGTATATGCTTTATTCGATTGAAAGAGCAAAGAAGTGCTTGGACTTTTCAGCTACTCTCTACATTGTCCATCTTTTTATATGCATTGTGTACGGGGGTTGGCCCTCTACTATAACATGGTGGATTGTGAATGGTACTGGAATTGCAGTGATGGCTTTACTAGGTGAATATCTGTGTATCAGGCGGGAACTCCGGGAGATACCAATAACACGATATCGTTCTAATGTTTGA 459 0.4248 MFYGAVVWDPWLIVAQIVCLQCLYYITLGLLLSILVGTRVSRMSLVYFFDYVTITTSTVTGWCVIASFLLSSVAGAVYMLYSIERAKKCLDFSATLYIVHLFICIVYGGWPSTITWWIVNGTGIAVMALLGEYLCIRRELREIPITRYRSNV* 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g02170 152 PIRSF SYS1_homolog 1 152 IPR016973 GO:0000139
Rops4g02170 152 PANTHER SYS1 1 150 IPR019185 -
Rops4g02170 152 Pfam Integral membrane protein S linking to the trans Golgi network 5 144 IPR019185 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g02170 Rops-Chr4 48153043 48155668 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g02170 K20318 - tcc:18595890 291.967
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops4g02170 4 48153043 48155668 Rops4g02170 4 48153043 48155668 ECH