Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g02162 ATGTTTCGGTGGCTATTGAAGCCGAAATTCTATTCAAAATGCATATCGTACGGGAAGTCTATAAAAATACGGCTAGAAACAATACAGAAGAAGAGGAAAGCAGTTCAGAAGTTTCTGAAGGGTGACATTGCTGAGCTTCTTATGAGTGGCCTTGACTACGATGCATATAAAAAGGCTGAAGGGCTTCTGTTCGAGCAAAATGTGTTATCCTGCTATGAACTCATTGCGAAGTTTATTGGATGCATATCAGATCATCTTGAAGACCTAACTAAGCAGAAGGATTGCCCTGATGAATGCAAGGAAGCTGTACCATCATTGATGTATGCTGCAGCAAGATTTGCTGATCTGCCAGAATTGCGTGACCTCAGAACTTTGTTTACCGAGAAATATGGGAATTCTCTTGAGCCTTACACAAGTAAAGAGTTCGTTGAGAAATTAAGACGAGATCGTCCTACAAGAGAAATGAAGATTAGATTGTTATATGATATAGCACAAGAGTTCTCTATAGGGTGGGATGCCAAGGCTTTGAAGCAAAGACTTTATACACAGCCATCATTACATGAAGAGAGGCCTAAGGCTGATAACATAGACAATCAAGTGAGTGGTGGAGAAGAACACAAAGATGGAAGAGACAGCAACACATCCAAAGGAAAGGAAAGAGACACCCTATTGAGGTACCAAAGCAGTAGTGATGATGAAACAAGTACAGACAGGTCATCAGTTGATGGAGGAAAGGGTAGTTCAAGTTCATTGGGGAGCGTATCAGAGGATGATGAAGTAGAAATTAAGAGGCCAATTTCCTATTGGCTCGTTCCACCCCCTTACCTCAAACAAAAAACTAACAAGGGTGAAACCAATAATTCATTAAAGAAAACAACAGATTCTGAAGCTGTACAGAAAAAAGAATCAAGCCAGTATCTTCATGAACCGGATTTTAAACAAAAGACAAGACCCAAGAGACATGTCAAATCAAAACCTGGCCAAGACAGTGTTTCTGATTCTAAAACTTATGATTCAGGTGGAATGAAATCAGGGAAAGGAAAAGCTTATCCTTCTGAATATGATACAGGGCAAAACAGAAGGCCTACAACATCTCATGTCAGAGGAACATCTCTTCCTAATGAATCCAAAACATTTCAAGGGCATACACGAACAATATCATTGGATTCAGAAATGCGGGGTGGTGCAGGGCATGTGCATCCTAAGCTACCAGATTATGATGAATTGGTAGCTCGTCTTGCAGCTCTCAGAGGGAGATAA 1260 0.4056 MFRWLLKPKFYSKCISYGKSIKIRLETIQKKRKAVQKFLKGDIAELLMSGLDYDAYKKAEGLLFEQNVLSCYELIAKFIGCISDHLEDLTKQKDCPDECKEAVPSLMYAAARFADLPELRDLRTLFTEKYGNSLEPYTSKEFVEKLRRDRPTREMKIRLLYDIAQEFSIGWDAKALKQRLYTQPSLHEERPKADNIDNQVSGGEEHKDGRDSNTSKGKERDTLLRYQSSSDDETSTDRSSVDGGKGSSSSLGSVSEDDEVEIKRPISYWLVPPPYLKQKTNKGETNNSLKKTTDSEAVQKKESSQYLHEPDFKQKTRPKRHVKSKPGQDSVSDSKTYDSGGMKSGKGKAYPSEYDTGQNRRPTTSHVRGTSLPNESKTFQGHTRTISLDSEMRGGAGHVHPKLPDYDELVARLAALRGR* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g02162 419 MobiDBLite consensus disorder prediction 240 255 - -
Rops4g02162 419 PANTHER IST1 FAMILY MEMBER 13 417 IPR005061 GO:0015031
Rops4g02162 419 Pfam Regulator of Vps4 activity in the MVB pathway 21 169 IPR005061 GO:0015031
Rops4g02162 419 Gene3D - 4 180 IPR042277 -
Rops4g02162 419 MobiDBLite consensus disorder prediction 184 259 - -
Rops4g02162 419 MobiDBLite consensus disorder prediction 274 382 - -
Rops4g02162 419 FunFam Vacuolar protein sorting-associated protein IST1 6 179 - -
Rops4g02162 419 MobiDBLite consensus disorder prediction 294 316 - -
Rops4g02162 419 MobiDBLite consensus disorder prediction 279 293 - -
Rops4g02162 419 MobiDBLite consensus disorder prediction 184 239 - -
Rops4g02162 419 MobiDBLite consensus disorder prediction 356 382 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g02162 Rops-Chr4 48088790 48092193 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g02162 - - gmx:102665874 447.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops4g02162 4 48088790 48092193 Rops4g02162 4 48088790 48092193 ECH