Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g02155 ATGGACGCGAAAGAAGGAAACCCAAAATTCCCAGGTTTCCCATTCAAACCGTATTCAATCCAAATCGATTTCATGAACGCTCTCTATGAATCCCTCAACAAAGGTGGAATCGCCATGTTGGAAAGCCCAACCGGTACTGGGAAGACCATGAGTGTCATTTGTAGTGCTTTGCAATGGGTACTTGATCGCCGGCGACAACCAGAAGTTGCAGGGTCTGACAATGGTGGTGGCCAAGGTGGTTCAGATGATGAACCTGATTGGATGAGAGACTTTGTCGTCAACAAAATTCAGAGTAAAAAGGAAAACTTTGGGTCTATGTTAGGAAAATTTGATAATAATAATAATACTAGGAAGAAGAAAAACAAGGGAAGTTCTAAAGATTTTAAGAATGTGGGCATTATTGGAGAATCTCTTACTGAAAAGGGGTGTGAGAATTTCCAGAATAAAATTGATACAGTGAATGTTACTGATGAGGAGATTTTACTGGAAGAATATGAGAGTGAAGATGAGAAAGCTCTGGGTAGTGTTGCATCCAAGAGGAAGGCTACTACTAAAACCAATTTTACTTCCTCAAGTGAAGATGAGTCCAATGATGATGATGATGAGGAGGAGGAGGAAGAGAAGTTGAAGGTTTATTTCTGCAGTAGAACACATTCACAGCTTTCACAGTTCATAAAAGAGTTACAGAAGACAGTCTTTGCTGAAGAGATGAGTGTTGTGAGTTTAGGCTCAAGGAAAAATCTTTGCATTAATCAAGAAGTAGTGACACTTGGAAACTCCACACGCATAAATGAGCGATGCTTGGAACTCCAGAAGAAAAAGAAAAATGAAGCAACAAAAGTTAAGAACTTAAGAGTAGGTGCAGCGGTACGCAGAACAAAGGCCTCCTCTGGCTGCCCAATGCTTAGAAAACATAGAATACAACAAGAATTCAGGAACGAGGTATCTCAACAAGGCCCTTTGGATATTGAAGATCTTGCTAACCTTGGAAGAACTATGGGAACTTGTCCATACTATGGGTCTAGAAGCATGGTTCGGAGAGCTGATCTTGTGGTCCTACCATATCAATCTCTTCTTTCAAAATCATCTCGTGAAGCACTTGGTCTGAATTTGAAATCCAATATCGTTATAATAGACGAGGCTCATAATTTAGCTGATTCACTCATCAGCATGTATGACTCAAAAATTACTTTATCACAGCTAGAGAATGTGCATTGCCATGTGGAGCGGTACTTTGCGAGATTCCGGAACCTTTTGGGACCTGCTAATAGGAGATATATTCAAACTCTGATGGTCCTCACACAAGCATTTCTCCGAGTACTGCTCAATGAGAAGGATGGAAATCTCATAGATTCTTGTCGTGATATAGAACATGCTTCTGAAGAAATTAGAGCCTCTGATTTTACCATGGCCATCAATGATTTTCTATTTGAACTAAATATAGACAATATCAACTTGGTCAAATTGTTAAAGTATATAAAGGAAAGTAACATCATGCACAAGGTTAGTGGTTATGGAGAAAAACTAGCTACCATGGAGAAGATATCAGCACTCGATCTAACACGGGAACATGGTGAAGAAGGAAGCTGTCAGTCTGCTTTCCAGGCATTAGCTGACATGTTGCTATCACTGACAAACAATGACAGTGATGGAAGGATAGTAATTTCCAGGTCTAGACCAACGAGCTTGAGGAAACAAGGAGGATATATTAAATATGTTATGCTCAGTGGGCAGAAGATTTTCTCCGAGATTGTAGATGAAGCACATGGCGTTGTATTAGTAGGGGGAACACTTCAACCTATAGAAGAGACAAGGGAGCGACTCTTTCCATGGTTACCATCGAATCAGTTGCATTTCTTTTCATGTGGTCATATTGTCCCTCCAGATAGCATTATGCCAATTGCAGTTACCCGTGGCCCTACTGGCCGCTCCTTTGATTTTAGCTACAGCTCTAGGATCTCACCGGACACGATGAGAGAACTTGGTCTTTTGTTATGCAACTTGGTGACTGTGGTGCCTGAAGGAATTGTAGTCTTCTTCCCTTCTTTTGATTATGAAGGTAAAGTCTATGAAAACTGGCAGTCTTCTGGCATCCTTGAAAGGATTACAAAGAGGAAGCGTGTCTTCAGAGAGCCTAGAAATAATATGGATGTTGAATCTGTTCTCAAGGAATATAAAGATACCATTTATAATCCATCGAATTTGAATTCAGCAGTAAACCAAGTATCTCATAGTGGTGCAATACTCCTAGCTGTTGTTGGTGCGAAGATATCTGAAGGGATCAACTTAAGCGATGGGATGGGTCGATGTATAGTCATGGTTGGACTGCCATATGCTAGCCCATCTGACATTGAGTTGTTGGAGAGGATAAAACATATTGAAGGTTTTCGAAATTCAAAGTTCCTTGCAAATCCTAGATTTTCTGCTGGCTATGACGTATACAGTGGAGATGTACAAGGTGGTTTTGACATCTTAAAAAGTTGCAGTCACAGGGGAAAAGAGTATTATGAGAATCTGTGCATGAAAGCCGTAAATCAATCAATAGGTAGAGCAATCCGTCACATTAATGACTATGCAGCAATTTTGTTGGTTGACGCAAGGTATGCATCTGATTCCTCAAAACGGAGCTTTGCCCACCCAATAACCAAGCTCCCCCAGTGGATAAAATATCGTCTTGTTTCTTCTACCAATAAGTATGGCGAAGTACATAGGTTGCTGCATCAGTTTTTCAAACTCAAAAAGACATGCTGCCAAATAGTCCCTGCAGCAGATCTTATTGTATAA 2784 0.4048 MDAKEGNPKFPGFPFKPYSIQIDFMNALYESLNKGGIAMLESPTGTGKTMSVICSALQWVLDRRRQPEVAGSDNGGGQGGSDDEPDWMRDFVVNKIQSKKENFGSMLGKFDNNNNTRKKKNKGSSKDFKNVGIIGESLTEKGCENFQNKIDTVNVTDEEILLEEYESEDEKALGSVASKRKATTKTNFTSSSEDESNDDDDEEEEEEKLKVYFCSRTHSQLSQFIKELQKTVFAEEMSVVSLGSRKNLCINQEVVTLGNSTRINERCLELQKKKKNEATKVKNLRVGAAVRRTKASSGCPMLRKHRIQQEFRNEVSQQGPLDIEDLANLGRTMGTCPYYGSRSMVRRADLVVLPYQSLLSKSSREALGLNLKSNIVIIDEAHNLADSLISMYDSKITLSQLENVHCHVERYFARFRNLLGPANRRYIQTLMVLTQAFLRVLLNEKDGNLIDSCRDIEHASEEIRASDFTMAINDFLFELNIDNINLVKLLKYIKESNIMHKVSGYGEKLATMEKISALDLTREHGEEGSCQSAFQALADMLLSLTNNDSDGRIVISRSRPTSLRKQGGYIKYVMLSGQKIFSEIVDEAHGVVLVGGTLQPIEETRERLFPWLPSNQLHFFSCGHIVPPDSIMPIAVTRGPTGRSFDFSYSSRISPDTMRELGLLLCNLVTVVPEGIVVFFPSFDYEGKVYENWQSSGILERITKRKRVFREPRNNMDVESVLKEYKDTIYNPSNLNSAVNQVSHSGAILLAVVGAKISEGINLSDGMGRCIVMVGLPYASPSDIELLERIKHIEGFRNSKFLANPRFSAGYDVYSGDVQGGFDILKSCSHRGKEYYENLCMKAVNQSIGRAIRHINDYAAILLVDARYASDSSKRSFAHPITKLPQWIKYRLVSSTNKYGEVHRLLHQFFKLKKTCCQIVPAADLIV* 928
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g02155 927 SMART Cxpdneu3 683 870 IPR006555 GO:0003676|GO:0004386|GO:0005524|GO:0006139|GO:0016818
Rops4g02155 927 Pfam DEAD_2 213 401 IPR010614 GO:0003677|GO:0003678|GO:0005524
Rops4g02155 927 MobiDBLite consensus disorder prediction 172 204 - -
Rops4g02155 927 NCBIfam DNA repair helicase (rad3) 151 898 IPR013020 GO:0003678
Rops4g02155 927 SMART ultradead3 13 459 IPR014001 -
Rops4g02155 927 Pfam Helicase C-terminal domain 665 880 IPR006555 GO:0003676|GO:0004386|GO:0005524|GO:0006139|GO:0016818
Rops4g02155 927 Gene3D - 175 440 IPR027417 -
Rops4g02155 927 PANTHER DNA REPAIR DEAD HELICASE RAD3/XP-D SUBFAMILY MEMBER 13 911 IPR045028 -
Rops4g02155 927 MobiDBLite consensus disorder prediction 66 87 - -
Rops4g02155 927 CDD SF2_C_XPD 629 868 - -
Rops4g02155 927 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-2 domain profile. 7 440 IPR014013 GO:0005524
Rops4g02155 927 MobiDBLite consensus disorder prediction 104 126 - -
Rops4g02155 927 Gene3D - 14 70 IPR027417 -
Rops4g02155 927 SMART deadxpd 9 424 IPR006554 GO:0003678|GO:0016818
Rops4g02155 927 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 13 395 IPR027417 -
Rops4g02155 927 Gene3D - 643 883 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g02155 Rops-Chr4 48007523 48012261 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g02155 K11273 - gmx:106794132 1422.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops4g02155 4 48007523 48012261 Rops4g02155 4 48007523 48012261 ECH