Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g02153 ATGAGCATGCCGAAGCCGAATCAGGTAACAGTGAGAGACCTCGCCGAGGAAGCTAAGAAACGCATCGTCATCCTCGTCGTTTGCGTCGTTGGACTCTCCTATCTCATGTCCTTGACAAGCTCCTCAGTTTGGGTCAACTTGCCAGCTGCAGCCTCCTTAATCATCATTTTCCGCTATTTATCACTAGATTTTGAAATGAAGAGAAAAGCTGCAGCATACAACAATAAAGCAGGCTCTGCCAGTGTTCAGTCTTCAAAGAAACCTATTGAAAATGCTAAAGTTGTTGCAAAGTTTGAGTGGAGAACAAAAGTGAATTCTCCTGTTGTTGAGGATGCGATTGATCACTTCATCAGACATCTAGTTTCTGAGTGGGTGACAGATCTTTGGTACTCTCGCTTAACACCAGACAAAGAGGGTCCTGAGGAGTTAGTGCAAATAATTAATGGTGTTCTTGGGGAAATTTCAGGACGCATGAGAAATATAAATCTGATTGATTTTTTAATAAGGGATCTTATTAATCTCATTTGCACACACTTAGAGCTGTTTCGTGTTGCTCAATCAAAGATTGAAAAACAACACACAGGTTCATTGACAATTGAAAGTCGAGATATGGAACTAAAAGTTGCCTTGGCTGCTGAAAACAAATTGCATCCTGCTTTATTTTCTGCTGAAGCTGAACATAAGGTTTTGCAGCATCTGGTGAGTGGTCTTATGTCTGTCACTTTCAAGTTTGAGGACTTGCAGTGTTCTTTCTTTCGATATACTGTCAGGGAGCTTCTTGCATGTGCTGTAATACGACCTGTCCTAAATTTAGCCAATCCAAGATTTATTAATGAAAGGATTGAATCTATAGTAGTTAATAAGACCAAGGTTAACAAGGGGGTTGCTGCAGCTCAAGAGGCATCGCACGCTAAAGCAGATGAGTTACAGACGTCATCTGACCATTTTTCCAAGTGTTTGGATCCTTCTGCTATTGGTGTTGAGCTTGTGAATCTAAGAAACGGTCAATCCAGAAAGGCAGAGTCAACTGCAGAAAATAATTCCCATGATAATATTTCTAAAGATCCATTGCTTTCGGTTGATGCTCGATCTTCCCGTTCGTGGAAAGCACTGCCTGCAAACTCCCAACCTAATGGTGATCAAGGTATTCAACGACATCGCTTAGGAGGAGAGTGGGGAGATATTTTAGATGTCATCTCTCTCAGAAAGACCCAAGCTCTTGCTCCAGAACATTTTGAGAATGTGTGGACAAAGGGGAAAAATTATAAGAAAAAGGATCGCGAGAACCAGTCAAATGAGCAAGTACCGCAGCATCCTGTGGTAGGAAAATCGCCAAAGGTAGATCATATAAAGGTGATATCTGGACCCAAAGAAAAAGACACTATCTCGAAGCCTAATCCCTCTAAGGGAGGCCACGTTAATTCTGGACACAGCAGTCTATTCACTGTTGAAAATGCACCTTTTCATGCAGACAAGAATGACGATGACAACCACATTTATATGCAGACGAGTGAATCTGAGAGCAATACTTCTTATACTACTGAAGATGATGAGACTAGTACAATCACTGGTCTTGATTCCCCTGGAACTAAAGTTTGGGATGGAAGAAGCAATAGAAACCAGGCTGTTTCTTATGTTCATCACCCACTTGAAAATTTTGATAATCATGGTACAAAGAAGAGGAATAAGAGCCATTCTCGCTATCCGAGATTACCCAGAACCCAATCGGGCAGTAAAAGATCTAGGTCAAGCGGTCATAAAACACGTATGTGGGAAGAAGTTGAGAGAACAAGCTTTTTATCTGGAGATGGTCAAGACATACTTAGTTCTTCAAAATCACATTTAAATTCTGATGAGTCCAGTGATGATGCTGATTTTGAAAGTTTGGGTAGAATTTATAGTGGAGCAGCTGCCTCTTCTTCTGCATACTCTACTTCTAAATCAGAATCCTGTAGTTTGGCTGTTAATCCCCTGAAAAATTCCTCTGCCGTAGATTCCTTTTACAAGTTGAGATGCGAGGTCTTAGGTGCAAATATTGTGAAGAGTGGTTCTAGAACGTTTGCTGTTTACTCCATATCCGTTACAGATGTAAATAATAACAGTTGGTCAATTAAAAGAAGGTTTCGTCATTTTGAGGAGCTACATCGACGCCTGAAAGAGTTCCCTGAGTATAATCTTCATTTGCCACCAAAACATTTTCTGTCAACTGGTTTGGATGTACCAGTGATTCAAGAGCGATGTGAATTGCTTGATAAATATTTGAAGAAACTTATGCAGCTACCAACAATTTCAGAATCAATTGAAGTATGGGACTTTCTGAGTGTTGACTCTCAGACATACATATTCTCAAATTCTTTTTCTATCATGGAAACATTATCAGTTCGTCAGGATGCTAAGCTATCTGACAAGACTAAAAGCAGTTCCAACCCTTCTGCACTGGGAGGTGACCCTTTTGCCTATCGGAGAGAAAGCTGTAGTGCTGAAAGTAAAGAGGCTGTTTTGCGAACACAAAATAATGTTGTGGCTGATGGATTGAGGCCAAAATTAAATAGCGTGCCTCTTTCTCTACCAAAAAAGAATACACAGGAATCTAGAAAGTCATTTGACAATGCTGGCAGCAATACAGATATTCCAGCACAGAAGAATGCACCTTCTCCCAATAACTTGCAGAAGACAGTGAAAGGGAGAGATGGTTCAGATGAGGTTTCTAATGTGCACCGTGACAGTTCTGATGCTATTCCCACAGAGTGGGTGCCACCAAATTTGAGTGTACCCATATTGGACCTGGTTGATGTTATCTTCCAGCTTCAAGATGGTGGATGGATTAGGCGAAAGGCTTTTTGGGTTGCTAAACAAATCTTACAACTAGGAATGGGTGATGCCTTTGATGATTGGTTGATAGAGAAAATTCAGCTTCTCCGTAAGGGATCAGTGATTGCTTTAGGGGTCAGGCGAGTTGAGCAAATCCTCTGGCCTGATGGAATATTCATAACTAAGCATCCGAATCGACAACGACCACCACCACCTACTAGTCCATCTCAGAATTCACCTCAACCTACACAAGTATCTTCTCCGAGGATGGATGATGAGCAGCAAAAGGAGGCTGATCGTCGTGCAAAGTTTGTGTATGAGCTAATGATCGATCATGCACCACCAACAATTGTAGGTCTTGTTGGTCGGAAGGAGTATGAGCAATGTGCTAGGGATCTATATTTTTTCCTTCAGTCATCTGTTTGCTTGAAGCAGCTGGCTTTTGACCTCCTGGAGCTGCTGCTGCTATCAGCATTTCCAGAACTTGATGATGTATTCAAGCAGCTGCATGAAGAAAAGCATATATTTGGTGAGTTCCAAGCAAAGTAA 3360 0.4137 MSMPKPNQVTVRDLAEEAKKRIVILVVCVVGLSYLMSLTSSSVWVNLPAAASLIIIFRYLSLDFEMKRKAAAYNNKAGSASVQSSKKPIENAKVVAKFEWRTKVNSPVVEDAIDHFIRHLVSEWVTDLWYSRLTPDKEGPEELVQIINGVLGEISGRMRNINLIDFLIRDLINLICTHLELFRVAQSKIEKQHTGSLTIESRDMELKVALAAENKLHPALFSAEAEHKVLQHLVSGLMSVTFKFEDLQCSFFRYTVRELLACAVIRPVLNLANPRFINERIESIVVNKTKVNKGVAAAQEASHAKADELQTSSDHFSKCLDPSAIGVELVNLRNGQSRKAESTAENNSHDNISKDPLLSVDARSSRSWKALPANSQPNGDQGIQRHRLGGEWGDILDVISLRKTQALAPEHFENVWTKGKNYKKKDRENQSNEQVPQHPVVGKSPKVDHIKVISGPKEKDTISKPNPSKGGHVNSGHSSLFTVENAPFHADKNDDDNHIYMQTSESESNTSYTTEDDETSTITGLDSPGTKVWDGRSNRNQAVSYVHHPLENFDNHGTKKRNKSHSRYPRLPRTQSGSKRSRSSGHKTRMWEEVERTSFLSGDGQDILSSSKSHLNSDESSDDADFESLGRIYSGAAASSSAYSTSKSESCSLAVNPLKNSSAVDSFYKLRCEVLGANIVKSGSRTFAVYSISVTDVNNNSWSIKRRFRHFEELHRRLKEFPEYNLHLPPKHFLSTGLDVPVIQERCELLDKYLKKLMQLPTISESIEVWDFLSVDSQTYIFSNSFSIMETLSVRQDAKLSDKTKSSSNPSALGGDPFAYRRESCSAESKEAVLRTQNNVVADGLRPKLNSVPLSLPKKNTQESRKSFDNAGSNTDIPAQKNAPSPNNLQKTVKGRDGSDEVSNVHRDSSDAIPTEWVPPNLSVPILDLVDVIFQLQDGGWIRRKAFWVAKQILQLGMGDAFDDWLIEKIQLLRKGSVIALGVRRVEQILWPDGIFITKHPNRQRPPPPTSPSQNSPQPTQVSSPRMDDEQQKEADRRAKFVYELMIDHAPPTIVGLVGRKEYEQCARDLYFFLQSSVCLKQLAFDLLELLLLSAFPELDDVFKQLHEEKHIFGEFQAK* 1120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g02153 1119 MobiDBLite consensus disorder prediction 504 545 - -
Rops4g02153 1119 Pfam PXA domain 106 283 IPR003114 -
Rops4g02153 1119 Gene3D - 668 784 IPR036871 GO:0035091
Rops4g02153 1119 MobiDBLite consensus disorder prediction 336 360 - -
Rops4g02153 1119 SMART PXA_3 106 289 IPR003114 -
Rops4g02153 1119 MobiDBLite consensus disorder prediction 450 465 - -
Rops4g02153 1119 MobiDBLite consensus disorder prediction 368 382 - -
Rops4g02153 1119 CDD PX_SNX19_like_plant 670 774 - -
Rops4g02153 1119 Pfam Sorting nexin C terminal 941 1077 IPR013937 -
Rops4g02153 1119 MobiDBLite consensus disorder prediction 1000 1033 - -
Rops4g02153 1119 MobiDBLite consensus disorder prediction 854 893 - -
Rops4g02153 1119 SMART PX_2 672 776 IPR001683 GO:0035091
Rops4g02153 1119 SUPERFAMILY PX domain 669 777 IPR036871 GO:0035091
Rops4g02153 1119 ProSiteProfiles PXA domain profile. 106 289 IPR003114 -
Rops4g02153 1119 MobiDBLite consensus disorder prediction 418 479 - -
Rops4g02153 1119 MobiDBLite consensus disorder prediction 336 386 - -
Rops4g02153 1119 PANTHER PX SERINE/THREONINE KINASE PXK 102 1114 - -
Rops4g02153 1119 MobiDBLite consensus disorder prediction 504 596 - -
Rops4g02153 1119 Pfam PX domain 699 776 IPR001683 GO:0035091
Rops4g02153 1119 MobiDBLite consensus disorder prediction 851 914 - -
Rops4g02153 1119 MobiDBLite consensus disorder prediction 418 432 - -
Rops4g02153 1119 ProSiteProfiles PX domain profile. 668 780 IPR001683 GO:0035091
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g02153 Rops-Chr4 47996443 48004178 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g02153 K17925 - gmx:100790491 1766.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops4g02153 4 47996443 48004178 Rops4g02153 4 47996443 48004178 ECH